Orthogroup:group_168


Homologs in group_168

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10 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16725 FBDBKF_16725 Morganella morganii S1 hcp Type VI protein secretion system component Hcp (secreted cytotoxin)
EHELCC_10735 EHELCC_10735 Morganella morganii S2 hcp Type VI protein secretion system component Hcp (secreted cytotoxin)
NLDBIP_11080 NLDBIP_11080 Morganella morganii S4 hcp Type VI protein secretion system component Hcp (secreted cytotoxin)
LHKJJB_10275 LHKJJB_10275 Morganella morganii S3 hcp Type VI protein secretion system component Hcp (secreted cytotoxin)
HKOGLL_16440 HKOGLL_16440 Morganella morganii S5 hcp Type VI protein secretion system component Hcp (secreted cytotoxin)
F4V73_RS05140 F4V73_RS05140 Morganella psychrotolerans - Hcp family type VI secretion system effector
PMI_RS00995 PMI_RS00995 Proteus mirabilis HI4320 - Hcp family type VI secretion system effector
PMI_RS03690 PMI_RS03690 Proteus mirabilis HI4320 - Hcp family type VI secretion system effector
PMI_RS05420 PMI_RS05420 Proteus mirabilis HI4320 - Hcp family type VI secretion system effector
PMI_RS14785 PMI_RS14785 Proteus mirabilis HI4320 - Hcp family type VI secretion system effector

Distribution of group_168 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_168 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_168

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_168.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hcp 5
2 - 5

Product

# Product Occurence
1 Type VI protein secretion system component Hcp (secreted cytotoxin) 5
2 Hcp family type VI secretion system effector 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3157 10 U Intracellular trafficking, secretion, and vesicular transport (U) Type VI protein secretion system component Hcp (secreted cytotoxin)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11903 10 type VI secretion system secreted protein Hcp Biofilm formation - Pseudomonas aeruginosa
Bacterial secretion system		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05638 10 Type VI secretion system effector, Hcp

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG038369 6 hemolysin co-regulated protein VF0480 Effector delivery system
VFG038370 4 hemolysin co-regulated protein VF0480 Effector delivery system

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Major exported protein 1
Major exported protein (Fragment) 1
Uncharacterized protein YhhZ 1

Protein length

Unique protein length 172

Protein length distribution