Homologs in group_178

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03960 FBDBKF_03960 36.8 Morganella morganii S1 taaP trimeric autotransporter adhesin TaaP
EHELCC_06575 EHELCC_06575 36.8 Morganella morganii S2 taaP trimeric autotransporter adhesin TaaP
NLDBIP_06900 NLDBIP_06900 36.8 Morganella morganii S4 taaP trimeric autotransporter adhesin TaaP
LHKJJB_06435 LHKJJB_06435 36.8 Morganella morganii S3 taaP trimeric autotransporter adhesin TaaP
HKOGLL_04495 HKOGLL_04495 36.8 Morganella morganii S5 taaP trimeric autotransporter adhesin TaaP
F4V73_RS14140 F4V73_RS14140 37.2 Morganella psychrotolerans - YadA-like family protein
PMI_RS10460 PMI_RS10460 33.8 Proteus mirabilis HI4320 aipA trimeric autotransporter adhesin AipA
PMI_RS12715 PMI_RS12715 36.8 Proteus mirabilis HI4320 taaP trimeric autotransporter adhesin TaaP

Distribution of the homologs in the orthogroup group_178

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_178

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q2T6X7 2.22e-23 102 32 6 222 1 bimA Autotransporter BimA Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
P10858 1.1e-18 88 28 10 317 1 yadA Adhesin YadA Yersinia pseudotuberculosis serotype I (strain IP32953)
P0C2W0 2.26e-12 70 36 5 163 1 yadA Adhesin YadA Yersinia enterocolitica
P0C2W0 9.45e-05 47 28 4 120 1 yadA Adhesin YadA Yersinia enterocolitica
P31489 5.47e-12 68 37 3 140 1 yadA Adhesin YadA Yersinia enterocolitica
P31489 2.06e-05 48 29 4 120 1 yadA Adhesin YadA Yersinia enterocolitica
A0A0H2WHF1 2.11e-11 67 27 3 222 1 bpaC Autotransporter adhesin BpaC Burkholderia mallei (strain ATCC 23344)
A0A0H3HIJ5 6.08e-11 66 27 3 222 1 bpaC Autotransporter adhesin BpaC Burkholderia pseudomallei (strain 1026b)
A1JUB7 1.18e-10 64 37 1 110 1 yadA Adhesin YadA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A1JUB7 6.64e-05 47 28 4 120 1 yadA Adhesin YadA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A0A0H2VCA1 9.01e-08 56 27 8 225 1 upaG Autotransporter adhesin UpaG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VCA1 1.07e-05 50 32 2 104 1 upaG Autotransporter adhesin UpaG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8ZL64 4.85e-07 54 27 7 192 1 sadA Autotransporter adhesin SadA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7DJ60 5.77e-07 54 25 6 202 2 ehaG Autotransporter adhesin EhaG Escherichia coli O157:H7
Q7DJ60 0.000119 47 35 1 81 2 ehaG Autotransporter adhesin EhaG Escherichia coli O157:H7
Q5MWV9 1.9e-06 52 31 4 161 1 badA Autotransporter adhesin BadA Bartonella henselae
A0A0H3G586 8.22e-06 50 28 4 156 1 btaE Autotransporter adhesin BtaE Brucella suis biovar 1 (strain 1330)
Q9LA53 0.000181 46 41 0 60 1 eibE Immunoglobulin-binding protein EibE Escherichia coli
Q9MCI8 0.000242 45 31 2 120 1 eibD Immunoglobulin-binding protein EibD Escherichia coli
Q9MCI8 0.000274 45 32 1 84 1 eibD Immunoglobulin-binding protein EibD Escherichia coli
Q9LA56 0.000296 45 30 3 139 1 eibC Immunoglobulin-binding protein EibC Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10220
Feature type CDS
Gene -
Product YadA-like family protein
Location 153914 - 154744 (strand: -1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_178
Orthogroup size 9
N. genomes 7

Actions

Genomic region

Domains

PF03895 YadA-like membrane anchor domain
PF05658 YadA head domain repeat (2 copies)
PF05662 Coiled stalk of trimeric autotransporter adhesin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5295 Intracellular trafficking, secretion, and vesicular transport (U)
Extracellular structures (W)		 UW Autotransporter adhesin

Protein Sequence

MKLIKCSTLIGLFVSSCYTGNTLADSPYDITHNSPVFGTSIVQYHSFSDNHHYNKSVISGASATSQGDYTVAVGNNAKSEKHHTVSLGAYSRSAGEDSVALGYGAYTDRSRTVSIGNNYIKKQLINVADGTEDNDAVNVLQLNQKAENIQESINTSRNDAVNTSTHYTNNKINESTKKNDQQFQKIKTQFTKNEQRIDAFEKRVNAGLAGVTAISSIPYVSADNFSFGIGFGNYKNGNAIAAGAQYKPFENTNIRINTSLDNDNNSVVGAGLAIGW

Flanking regions ( +/- flanking 50bp)

GTTTTTAATATAAATAAATCACAAGCAACATAATAAAATGGATGTTAATTATGAAATTAATTAAATGCAGTACGCTTATTGGATTATTCGTATCATCTTGTTATACCGGAAATACTCTTGCTGATTCACCGTATGACATCACACACAACTCACCTGTTTTTGGTACTTCCATCGTTCAATATCATTCATTTTCAGATAACCATCACTATAATAAATCTGTTATTTCAGGTGCATCAGCCACATCTCAGGGCGACTATACTGTCGCTGTCGGTAACAATGCAAAATCTGAAAAACACCATACTGTCAGCCTTGGTGCTTATTCAAGATCTGCCGGAGAAGACTCTGTCGCACTCGGATATGGGGCATATACAGATCGTTCACGAACAGTTTCCATCGGGAACAATTATATCAAGAAGCAATTAATAAATGTGGCAGACGGCACTGAAGATAATGATGCAGTTAATGTCCTGCAATTAAATCAGAAAGCAGAGAATATTCAGGAAAGTATTAATACTTCAAGAAATGATGCTGTAAATACAAGTACACACTATACAAATAATAAAATAAATGAATCTACGAAGAAAAACGATCAACAATTTCAAAAGATAAAAACACAGTTTACTAAAAATGAACAGCGCATCGATGCTTTTGAAAAACGCGTAAATGCCGGTCTTGCCGGTGTAACCGCTATTTCATCAATCCCTTATGTTTCTGCAGATAATTTTTCATTCGGGATAGGGTTCGGTAATTACAAAAACGGCAATGCCATCGCCGCAGGTGCGCAATATAAACCATTTGAGAATACAAATATCCGTATCAATACCTCCCTCGATAATGATAATAACTCTGTTGTTGGTGCAGGCCTTGCCATCGGCTGGTAATAAATAGTGACCGCGCAGGGGGATACCTCTGCGTTATATTACAGATAGTT