Homologs in group_81

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11 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01590 FBDBKF_01590 58.1 Morganella morganii S1 - Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein
FBDBKF_06415 FBDBKF_06415 51.3 Morganella morganii S1 smc Chromosome segregation ATPase Smc
EHELCC_02060 EHELCC_02060 58.1 Morganella morganii S2 - Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein
EHELCC_09460 EHELCC_09460 51.3 Morganella morganii S2 smc Chromosome segregation ATPase Smc
NLDBIP_01400 NLDBIP_01400 58.1 Morganella morganii S4 - Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein
NLDBIP_09840 NLDBIP_09840 51.3 Morganella morganii S4 smc Chromosome segregation ATPase Smc
LHKJJB_00635 LHKJJB_00635 58.1 Morganella morganii S3 - Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein
LHKJJB_07915 LHKJJB_07915 51.3 Morganella morganii S3 smc Chromosome segregation ATPase Smc
HKOGLL_00675 HKOGLL_00675 58.1 Morganella morganii S5 - Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein
HKOGLL_07465 HKOGLL_07465 51.3 Morganella morganii S5 smc Chromosome segregation ATPase Smc
PMI_RS10715 PMI_RS10715 23.7 Proteus mirabilis HI4320 - YadA-like family protein

Distribution of the homologs in the orthogroup group_81

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_81

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31489 3.14e-31 127 60 0 88 1 yadA Adhesin YadA Yersinia enterocolitica
A1JUB7 4.67e-31 126 59 0 88 1 yadA Adhesin YadA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P0C2W0 2.58e-30 124 60 0 85 1 yadA Adhesin YadA Yersinia enterocolitica
P10858 1.01e-29 122 58 0 85 1 yadA Adhesin YadA Yersinia pseudotuberculosis serotype I (strain IP32953)
Q9JXK7 1.51e-21 98 44 1 104 1 nadA Neisseria adhesin A Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
A0ELI2 3.16e-21 97 31 10 256 1 nadA Neisseria adhesin A Neisseria meningitidis serogroup B
P0DV44 1.97e-20 95 47 1 90 1 nadA Neisseria adhesin A Neisseria meningitidis serogroup B
Q9LA60 6.71e-20 94 35 3 144 1 eibA Immunoglobulin-binding protein EibA Escherichia coli
Q9MCI8 1.04e-19 94 37 5 167 1 eibD Immunoglobulin-binding protein EibD Escherichia coli
Q9LA56 1.28e-19 94 37 5 167 1 eibC Immunoglobulin-binding protein EibC Escherichia coli
Q9LA53 5.91e-19 92 35 4 191 1 eibE Immunoglobulin-binding protein EibE Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19530
Feature type CDS
Gene -
Product YadA C-terminal domain-containing protein
Location 94358 - 95629 (strand: 1)
Length 1272 (nucleotides) / 423 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_81
Orthogroup size 12
N. genomes 7

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Genomic region

Domains

PF03895 YadA-like membrane anchor domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5295 Intracellular trafficking, secretion, and vesicular transport (U)
Extracellular structures (W)		 UW Autotransporter adhesin

Protein Sequence

MKKSLLALIIAPLFVHAADTGNKVTEVRFNSLYHDYPVRFLEKKSDGDRAAGVSELRQTIDYLGQNIRENNEFLGGLQDEITRNQRIAMDESGKLDDKITSIGELVDNTHQQIKTFMVDITENQVPEYVNSVLPGLVGNEIDYRVSTAIEQQVSVFEEKLPEYAGHVLPELVKNEVGSHVSVALENQVLPLAQRTESLEDKAQQLDIQLDITARKSLHNNMLIGTIPGMIKDEMNEYDEYMTTQIEPLKRQADQTEFAVLEVEKTIESAKVVTAVIMDATTSLEADVDALNTRVSNASKKANITSNVATGNRKDIDQHTVKIEKNALDMLKNRQDLRGLENDLRETNERLDNGLAANAALNGLFQPYGIGKLNITAAMGGYNSTQAVAVGTGYRFNENIAMKTGVSYTGSNDVMYNMAVNLEW

Flanking regions ( +/- flanking 50bp)

CAGAGATATATTCTATTGAAATTCATTCCTCTCCCTATCAGGATAATTACATGAAAAAAAGTTTATTAGCGTTAATTATTGCACCCTTATTTGTTCACGCAGCAGATACAGGAAATAAGGTAACAGAAGTCAGATTTAATTCGCTGTACCATGATTACCCTGTAAGATTTTTGGAGAAAAAATCAGATGGTGATCGTGCGGCAGGCGTTTCTGAATTACGCCAGACGATTGACTATCTGGGGCAAAATATCAGAGAAAATAACGAATTTCTGGGTGGACTACAGGATGAGATTACCCGAAATCAGCGAATCGCTATGGATGAGTCTGGTAAACTGGATGATAAAATTACATCAATCGGTGAGTTGGTCGATAATACCCATCAGCAAATAAAGACATTTATGGTAGATATCACTGAGAACCAGGTTCCTGAATATGTGAACAGTGTTCTGCCCGGGCTGGTCGGAAACGAGATTGACTATCGTGTCTCAACCGCAATAGAACAGCAGGTTTCTGTATTTGAAGAAAAATTACCTGAATATGCCGGACATGTACTGCCGGAACTGGTAAAAAATGAGGTTGGCAGCCATGTATCTGTTGCACTGGAAAATCAGGTTTTACCCTTAGCGCAACGTACAGAATCATTAGAAGACAAAGCACAGCAGTTAGATATCCAACTGGATATTACCGCGCGAAAATCGCTGCATAATAATATGCTTATCGGCACCATTCCCGGTATGATTAAAGATGAAATGAATGAGTATGACGAGTATATGACCACTCAGATTGAGCCTCTGAAGCGTCAGGCCGATCAAACTGAGTTTGCTGTTCTGGAAGTGGAAAAAACAATAGAATCAGCAAAAGTGGTTACAGCCGTAATTATGGATGCCACAACCAGTCTGGAAGCAGACGTTGATGCGCTGAATACCCGGGTTAGTAATGCATCTAAAAAAGCAAATATCACAAGTAACGTAGCCACCGGGAACAGAAAAGATATTGATCAACATACAGTGAAAATCGAGAAAAATGCCCTCGATATGCTGAAAAATCGTCAGGACTTGCGTGGTCTGGAAAATGACCTGCGGGAAACCAATGAACGCCTTGATAATGGTCTTGCTGCTAATGCGGCATTGAATGGTTTATTCCAGCCATACGGTATCGGAAAACTGAATATCACGGCAGCGATGGGAGGATACAACTCCACCCAGGCAGTGGCTGTGGGAACCGGCTACCGGTTCAACGAGAACATCGCGATGAAAACGGGTGTTTCATACACCGGTTCAAACGATGTGATGTACAACATGGCAGTTAACCTTGAGTGGTAATGCTGTGTGATGGTGACTGAATAGTCATGTTCTTTATACCCTTATTCATT