Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02342, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 28 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link | PF02342 |
---|---|
Description | TerD domain |
Occurence in the database
PF02342 is associated with 28 different proteins (see tab "Protein list" and "Profile") |
The 28 proteins are classified into 3 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_54 | FBDBKF_13840 | 63386 | 63961 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S1 |
1 | group_54 | FBDBKF_13845 | 64022 | 64600 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S1 |
2 | group_1853 | FBDBKF_13860 | 66175 | 67332 | -1 | terA | Tellurium resistance protein TerA/TerD | Morganella morganii S1 |
3 | group_1854 | FBDBKF_13865 | 67332 | 67919 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S1 |
4 | group_54 | EHELCC_11510 | 148262 | 148837 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S2 |
5 | group_54 | EHELCC_11515 | 148898 | 149476 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S2 |
6 | group_1853 | EHELCC_11530 | 151051 | 152208 | -1 | terA | Tellurium resistance protein TerA/TerD | Morganella morganii S2 |
7 | group_1854 | EHELCC_11535 | 152208 | 152795 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S2 |
8 | group_54 | NLDBIP_11855 | 148262 | 148837 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S4 |
9 | group_54 | NLDBIP_11860 | 148898 | 149476 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S4 |
10 | group_1853 | NLDBIP_11875 | 151051 | 152208 | -1 | terA | Tellurium resistance protein TerA/TerD | Morganella morganii S4 |
11 | group_1854 | NLDBIP_11880 | 152208 | 152795 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S4 |
12 | group_54 | LHKJJB_11715 | 148262 | 148837 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S3 |
13 | group_54 | LHKJJB_11720 | 148898 | 149476 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S3 |
14 | group_1853 | LHKJJB_11735 | 151051 | 152208 | -1 | terA | Tellurium resistance protein TerA/TerD | Morganella morganii S3 |
15 | group_1854 | LHKJJB_11740 | 152208 | 152795 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S3 |
16 | group_54 | HKOGLL_10325 | 148262 | 148837 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S5 |
17 | group_54 | HKOGLL_10330 | 148898 | 149476 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S5 |
18 | group_1853 | HKOGLL_10345 | 151051 | 152208 | -1 | terA | Tellurium resistance protein TerA/TerD | Morganella morganii S5 |
19 | group_1854 | HKOGLL_10350 | 152208 | 152795 | -1 | terZ | Stress response protein SCP2 | Morganella morganii S5 |
20 | group_54 | F4V73_RS12705 | 141925 | 142500 | -1 | TerD family protein | Morganella psychrotolerans | |
21 | group_54 | F4V73_RS12710 | 142633 | 143211 | -1 | TerD family protein | Morganella psychrotolerans | |
22 | group_1853 | F4V73_RS12725 | 144784 | 145953 | -1 | TerD family protein | Morganella psychrotolerans | |
23 | group_1854 | F4V73_RS12730 | 145953 | 146540 | -1 | TerD family protein | Morganella psychrotolerans | |
24 | group_54 | PMI_RS11790 | 2607748 | 2608323 | -1 | TerD family protein | Proteus mirabilis HI4320 | |
25 | group_54 | PMI_RS11795 | 2608400 | 2608978 | -1 | terD | tellurium resistance membrane protein TerD | Proteus mirabilis HI4320 |
26 | group_1853 | PMI_RS11810 | 2610586 | 2611728 | -1 | TerD family protein | Proteus mirabilis HI4320 | |
27 | group_1854 | PMI_RS11815 | 2611729 | 2612313 | -1 | tellurium resistance-associated protein TerZ | Proteus mirabilis HI4320 |