Orthogroup:group_484


Homologs in group_484

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00795 FBDBKF_00795 Morganella morganii S1 cheA chemotaxis protein CheA
EHELCC_00750 EHELCC_00750 Morganella morganii S2 cheA chemotaxis protein CheA
NLDBIP_02710 NLDBIP_02710 Morganella morganii S4 cheA chemotaxis protein CheA
LHKJJB_04225 LHKJJB_04225 Morganella morganii S3 cheA chemotaxis protein CheA
HKOGLL_02820 HKOGLL_02820 Morganella morganii S5 cheA chemotaxis protein CheA
F4V73_RS06795 F4V73_RS06795 Morganella psychrotolerans cheA chemotaxis protein CheA
PMI_RS08145 PMI_RS08145 Proteus mirabilis HI4320 cheA chemotaxis protein CheA

Distribution of group_484 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_484 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_484

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_484.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cheA 7

Product

# Product Occurence
1 chemotaxis protein CheA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0643 7 T Signal transduction mechanisms (T) Chemotaxis protein histidine kinase CheA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03407 7 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Two-component system
Bacterial chemotaxis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01584 7 CheW-like domain
PF01627 7 Hpt domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF02895 7 Signal transducing histidine kinase, homodimeric domain
PF09078 7 CheY binding

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG043211 1 chemotaxis protein CheA VF0394 Motility

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Adaptive-response sensory kinase SasA 1
Alginate biosynthesis sensor protein KinB 1
Chemotaxis protein CheA 12
Gliding motility regulatory protein 1
Sensor histidine kinase CheAY 1
Sporulation kinase C 1
Sporulation kinase D 1

Protein length

Min length 684
Max length 739
Mean length (sd) 696.1 (19.0)
Median length 690.0

Protein length distribution