PF01521
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01521, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 28 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF01521 |
Description |
Iron-sulphur cluster biosynthesis |
Occurence in the database
PF01521 is associated with 28 different proteins (see tab "Protein list" and "Profile") |
The 28 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_524 |
FBDBKF_01125 |
209908 |
210231 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S1 |
1 |
group_1034 |
FBDBKF_05830 |
168938 |
169318 |
-1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S1 |
2 |
group_1315 |
FBDBKF_08100 |
158800 |
159144 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S1 |
3 |
group_1623 |
FBDBKF_10700 |
107675 |
108253 |
-1 |
nfuA |
NfuA family Fe-S biogenesis protein |
Morganella morganii S1 |
4 |
group_524 |
EHELCC_00420 |
98637 |
98960 |
1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S2 |
5 |
group_1034 |
EHELCC_11760 |
12176 |
12556 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S2 |
6 |
group_1315 |
EHELCC_13930 |
132994 |
133338 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S2 |
7 |
group_1623 |
EHELCC_15035 |
107665 |
108243 |
-1 |
nfuA |
NfuA family Fe-S biogenesis protein |
Morganella morganii S2 |
8 |
group_524 |
NLDBIP_03040 |
581176 |
581499 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S4 |
9 |
group_1034 |
NLDBIP_12100 |
12131 |
12511 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S4 |
10 |
group_1315 |
NLDBIP_14375 |
153869 |
154213 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S4 |
11 |
group_1623 |
NLDBIP_14865 |
107665 |
108243 |
-1 |
nfuA |
NfuA family Fe-S biogenesis protein |
Morganella morganii S4 |
12 |
group_524 |
LHKJJB_04555 |
188417 |
188740 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S3 |
13 |
group_1315 |
LHKJJB_08475 |
5536 |
5880 |
-1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S3 |
14 |
group_1034 |
LHKJJB_11960 |
12176 |
12556 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S3 |
15 |
group_1623 |
LHKJJB_14480 |
33483 |
34061 |
1 |
nfuA |
NfuA family Fe-S biogenesis protein |
Morganella morganii S3 |
16 |
group_524 |
HKOGLL_02490 |
98842 |
99165 |
1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S5 |
17 |
group_1315 |
HKOGLL_08025 |
5536 |
5880 |
-1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S5 |
18 |
group_1034 |
HKOGLL_10575 |
12176 |
12556 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S5 |
19 |
group_1623 |
HKOGLL_13100 |
33483 |
34061 |
1 |
nfuA |
NfuA family Fe-S biogenesis protein |
Morganella morganii S5 |
20 |
group_1034 |
F4V73_RS03495 |
748140 |
748520 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella psychrotolerans |
21 |
group_524 |
F4V73_RS07195 |
1497896 |
1498219 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella psychrotolerans |
22 |
group_1315 |
F4V73_RS12900 |
186790 |
187134 |
-1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella psychrotolerans |
23 |
group_1623 |
F4V73_RS14415 |
111031 |
111609 |
-1 |
nfuA |
Fe-S biogenesis protein NfuA |
Morganella psychrotolerans |
24 |
group_1315 |
PMI_RS00990 |
244074 |
244418 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Proteus mirabilis HI4320 |
25 |
group_1034 |
PMI_RS06850 |
1495403 |
1495771 |
-1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Proteus mirabilis HI4320 |
26 |
group_524 |
PMI_RS09170 |
2000016 |
2000339 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Proteus mirabilis HI4320 |
27 |
group_1623 |
PMI_RS14465 |
3208647 |
3209225 |
1 |
nfuA |
Fe-S biogenesis protein NfuA |
Proteus mirabilis HI4320 |