Orthogroup:group_1372


Homologs in group_1372

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08490 FBDBKF_08490 Morganella morganii S1 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
EHELCC_13035 EHELCC_13035 Morganella morganii S2 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
NLDBIP_13375 NLDBIP_13375 Morganella morganii S4 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
LHKJJB_13180 LHKJJB_13180 Morganella morganii S3 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
HKOGLL_11850 HKOGLL_11850 Morganella morganii S5 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
F4V73_RS09710 F4V73_RS09710 Morganella psychrotolerans rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
PMI_RS16785 PMI_RS16785 Proteus mirabilis HI4320 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB

Distribution of group_1372 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1372 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1372

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1372.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rlmB 7

Product

# Product Occurence
1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0566 7 J Translation, ribosomal structure and biogenesis (J) tRNA G18 (ribose-2'-O)-methylase SpoU

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03218 7 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00588 7 SpoU rRNA Methylase family
PF08032 7 RNA 2'-O ribose methyltransferase substrate binding

Annotations of the 103 SwissProt hits

Annotation Number of occurrences
23S rRNA (adenosine(1067)-2'-O)-methyltransferase 3
23S rRNA (guanosine(2553)-2'-O)-methyltransferase RlmP 1
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB 37
23S rRNA (uridine(2479)-2'-O)-methyltransferase 1
Probable methyltransferase TARBP1 1
Putative TrmH family tRNA/rRNA methyltransferase 11
Putative TrmH family tRNA/rRNA methyltransferase YacO 1
Putative tRNA (cytidine(34)-2'-O)-methyltransferase 1
Uncharacterized tRNA/rRNA methyltransferase AF_2399 1
Uncharacterized tRNA/rRNA methyltransferase BB_0516 1
Uncharacterized tRNA/rRNA methyltransferase BCG_3644c 1
Uncharacterized tRNA/rRNA methyltransferase MAB_0572 1
Uncharacterized tRNA/rRNA methyltransferase MAP_0479 1
Uncharacterized tRNA/rRNA methyltransferase MAV_0574 1
Uncharacterized tRNA/rRNA methyltransferase MG252 1
Uncharacterized tRNA/rRNA methyltransferase MG252 homolog 1
Uncharacterized tRNA/rRNA methyltransferase ML0324 1
Uncharacterized tRNA/rRNA methyltransferase MLBr00324 1
Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 1
Uncharacterized tRNA/rRNA methyltransferase MRA_3618 1
Uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 1
Uncharacterized tRNA/rRNA methyltransferase MT0904 1
Uncharacterized tRNA/rRNA methyltransferase MT3685 1
Uncharacterized tRNA/rRNA methyltransferase MUL_4155 1
Uncharacterized tRNA/rRNA methyltransferase Mb0905 1
Uncharacterized tRNA/rRNA methyltransferase Mb3610c 1
Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 1
Uncharacterized tRNA/rRNA methyltransferase Mjls_5122 1
Uncharacterized tRNA/rRNA methyltransferase Mkms_4822 1
Uncharacterized tRNA/rRNA methyltransferase Mmcs_4736 1
Uncharacterized tRNA/rRNA methyltransferase Mvan_5337 1
Uncharacterized tRNA/rRNA methyltransferase Rv0881 1
Uncharacterized tRNA/rRNA methyltransferase Rv3579c 1
Uncharacterized tRNA/rRNA methyltransferase YfiF 2
Uncharacterized tRNA/rRNA methyltransferase slr0955 1
Uncharacterized tRNA/rRNA methyltransferase slr1673 1
rRNA methyltransferase 1, mitochondrial 5
rRNA methyltransferase 3, mitochondrial 5
rRNA methyltransferase 3B, mitochondrial 1
tRNA (guanosine(18)-2'-O)-methyltransferase 7

Protein length

Min length 243
Max length 244
Mean length (sd) 243.9 (0.4)
Median length 244.0

Protein length distribution