Orthogroup:group_1101


Homologs in group_1101

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06265 FBDBKF_06265 Morganella morganii S1 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
EHELCC_09310 EHELCC_09310 Morganella morganii S2 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
NLDBIP_09690 NLDBIP_09690 Morganella morganii S4 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
LHKJJB_08065 LHKJJB_08065 Morganella morganii S3 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
HKOGLL_07615 HKOGLL_07615 Morganella morganii S5 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
F4V73_RS15655 F4V73_RS15655 Morganella psychrotolerans rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
PMI_RS11545 PMI_RS11545 Proteus mirabilis HI4320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA

Distribution of group_1101 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1101 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1101

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1101.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rsmA 7

Product

# Product Occurence
1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA 5
2 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0030 7 J Translation, ribosomal structure and biogenesis (J) 16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02528 7 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00398 7 Ribosomal RNA adenine dimethylase

Annotations of the 529 SwissProt hits

Annotation Number of occurrences
Probable ribosomal RNA small subunit methyltransferase A 1
Ribosomal RNA small subunit methyltransferase A 528

Protein length

Min length 270
Max length 272
Mean length (sd) 270.3 (0.8)
Median length 270.0

Protein length distribution