PF01048
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01048, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 34 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF01048 |
Description |
Phosphorylase superfamily |
Occurence in the database
PF01048 is associated with 34 different proteins (see tab "Protein list" and "Profile") |
The 34 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_76 |
FBDBKF_11110 |
46934 |
47641 |
-1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S1 |
1 |
group_2915 |
FBDBKF_13735 |
39648 |
40466 |
-1 |
xapA |
purine-nucleoside phosphorylase |
Morganella morganii S1 |
2 |
group_1875 |
FBDBKF_14005 |
99290 |
99991 |
1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Morganella morganii S1 |
3 |
group_409 |
FBDBKF_16960 |
19501 |
20256 |
-1 |
udp |
uridine phosphorylase |
Morganella morganii S1 |
4 |
group_76 |
FBDBKF_17750 |
10779 |
11498 |
-1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S1 |
5 |
group_76 |
EHELCC_05115 |
11827 |
12534 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S2 |
6 |
group_76 |
EHELCC_09775 |
190211 |
190930 |
-1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S2 |
7 |
group_2915 |
EHELCC_11405 |
124524 |
125342 |
-1 |
xapA |
purine-nucleoside phosphorylase |
Morganella morganii S2 |
8 |
group_1875 |
EHELCC_11680 |
184166 |
184867 |
1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Morganella morganii S2 |
9 |
group_409 |
EHELCC_16630 |
48254 |
49009 |
1 |
udp |
uridine phosphorylase |
Morganella morganii S2 |
10 |
group_76 |
NLDBIP_05435 |
52900 |
53607 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S4 |
11 |
group_76 |
NLDBIP_10155 |
190211 |
190930 |
-1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S4 |
12 |
group_2915 |
NLDBIP_11750 |
124524 |
125342 |
-1 |
xapA |
purine-nucleoside phosphorylase |
Morganella morganii S4 |
13 |
group_1875 |
NLDBIP_12020 |
184166 |
184867 |
1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Morganella morganii S4 |
14 |
group_409 |
NLDBIP_16840 |
48254 |
49009 |
1 |
udp |
uridine phosphorylase |
Morganella morganii S4 |
15 |
group_76 |
LHKJJB_02315 |
30424 |
31131 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S3 |
16 |
group_76 |
LHKJJB_07600 |
26308 |
27027 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S3 |
17 |
group_2915 |
LHKJJB_11610 |
124524 |
125342 |
-1 |
xapA |
purine-nucleoside phosphorylase |
Morganella morganii S3 |
18 |
group_1875 |
LHKJJB_11880 |
184166 |
184867 |
1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Morganella morganii S3 |
19 |
group_409 |
LHKJJB_16630 |
19501 |
20256 |
-1 |
udp |
uridine phosphorylase |
Morganella morganii S3 |
20 |
group_76 |
HKOGLL_07150 |
26308 |
27027 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S5 |
21 |
group_2915 |
HKOGLL_10220 |
124524 |
125342 |
-1 |
xapA |
purine-nucleoside phosphorylase |
Morganella morganii S5 |
22 |
group_1875 |
HKOGLL_10495 |
184166 |
184867 |
1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Morganella morganii S5 |
23 |
group_76 |
HKOGLL_15695 |
53864 |
54571 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella morganii S5 |
24 |
group_409 |
HKOGLL_17595 |
19501 |
20256 |
-1 |
udp |
uridine phosphorylase |
Morganella morganii S5 |
25 |
group_76 |
F4V73_RS08160 |
1696808 |
1697515 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella psychrotolerans |
26 |
group_2915 |
F4V73_RS12605 |
117487 |
118305 |
-1 |
|
purine-nucleoside phosphorylase |
Morganella psychrotolerans |
27 |
group_1875 |
F4V73_RS12860 |
176973 |
177674 |
1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Morganella psychrotolerans |
28 |
group_76 |
F4V73_RS15215 |
23767 |
24486 |
1 |
deoD |
purine-nucleoside phosphorylase |
Morganella psychrotolerans |
29 |
group_409 |
F4V73_RS18430 |
19829 |
20584 |
-1 |
udp |
uridine phosphorylase |
Morganella psychrotolerans |
30 |
group_1875 |
PMI_RS01030 |
253382 |
254089 |
-1 |
mtnN |
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Proteus mirabilis HI4320 |
31 |
group_409 |
PMI_RS05885 |
1289203 |
1290654 |
1 |
|
AMP nucleosidase |
Proteus mirabilis HI4320 |
32 |
group_76 |
PMI_RS11940 |
2640434 |
2641150 |
-1 |
deoD |
purine-nucleoside phosphorylase |
Proteus mirabilis HI4320 |
33 |
group_409 |
PMI_RS17555 |
3854459 |
3855217 |
1 |
udp |
uridine phosphorylase |
Proteus mirabilis HI4320 |