PF00403


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00403, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 26 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00403
Description Heavy-metal-associated domain

Occurence in the database

PF00403 is associated with 26 different proteins (see tab "Protein list" and "Profile")
The 26 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_771 FBDBKF_03555 114383 116788 1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S1
1 group_363 FBDBKF_13015 107391 110129 1 copA copper-exporting P-type ATPase CopA Morganella morganii S1
2 group_2091 FBDBKF_15710 75773 77419 -1 merA mercury(II) reductase Morganella morganii S1
3 group_2953 FBDBKF_15720 77664 77939 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S1
4 group_363 EHELCC_06330 277423 280161 1 copA copper-exporting P-type ATPase CopA Morganella morganii S2
5 group_771 EHELCC_06980 130315 132720 -1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S2
6 group_2091 EHELCC_16065 75073 76719 -1 merA mercury(II) reductase Morganella morganii S2
7 group_2953 EHELCC_16075 76964 77239 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S2
8 group_363 NLDBIP_06650 318488 321226 1 copA copper-exporting P-type ATPase CopA Morganella morganii S4
9 group_771 NLDBIP_07305 130188 132593 -1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S4
10 group_2953 NLDBIP_16290 3424 3699 1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S4
11 group_2091 NLDBIP_16300 3944 5590 1 merA mercury(II) reductase Morganella morganii S4
12 group_363 LHKJJB_03530 296012 298750 1 copA copper-exporting P-type ATPase CopA Morganella morganii S3
13 group_771 LHKJJB_06840 93934 96339 -1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S3
14 group_2091 LHKJJB_16500 75073 76719 -1 merA mercury(II) reductase Morganella morganii S3
15 group_2953 LHKJJB_16510 76964 77239 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S3
16 group_771 HKOGLL_04090 137048 139453 1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S5
17 group_363 HKOGLL_07005 217876 220614 1 copA copper-exporting P-type ATPase CopA Morganella morganii S5
18 group_2091 HKOGLL_16270 75073 76719 -1 merA mercury(II) reductase Morganella morganii S5
19 group_2953 HKOGLL_16280 76964 77239 -1 merP mercury resistance system periplasmic binding protein MerP Morganella morganii S5
20 group_363 F4V73_RS04945 1051231 1053717 1 heavy metal translocating P-type ATPase Morganella psychrotolerans
21 group_771 F4V73_RS11345 410447 412846 -1 zinc/cadmium/mercury/lead-transporting ATPase Morganella psychrotolerans
22 group_363 F4V73_RS16200 47787 50531 1 copA copper-exporting P-type ATPase CopA Morganella psychrotolerans
23 group_2953 F4V73_RS17000 23778 23975 -1 heavy-metal-associated domain-containing protein Morganella psychrotolerans
24 group_363 PMI_RS10710 2353322 2356276 1 copA copper-exporting P-type ATPase CopA Proteus mirabilis HI4320
25 group_771 PMI_RS17915 3937417 3939759 -1 zinc/cadmium/mercury/lead-transporting ATPase Proteus mirabilis HI4320