PF00403
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00403, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 26 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF00403 |
Description |
Heavy-metal-associated domain |
Occurence in the database
PF00403 is associated with 26 different proteins (see tab "Protein list" and "Profile") |
The 26 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_771 |
FBDBKF_03555 |
114383 |
116788 |
1 |
cadA |
zinc/cadmium/mercury/lead-transporting ATPase |
Morganella morganii S1 |
1 |
group_363 |
FBDBKF_13015 |
107391 |
110129 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Morganella morganii S1 |
2 |
group_2091 |
FBDBKF_15710 |
75773 |
77419 |
-1 |
merA |
mercury(II) reductase |
Morganella morganii S1 |
3 |
group_2953 |
FBDBKF_15720 |
77664 |
77939 |
-1 |
merP |
mercury resistance system periplasmic binding protein MerP |
Morganella morganii S1 |
4 |
group_363 |
EHELCC_06330 |
277423 |
280161 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Morganella morganii S2 |
5 |
group_771 |
EHELCC_06980 |
130315 |
132720 |
-1 |
cadA |
zinc/cadmium/mercury/lead-transporting ATPase |
Morganella morganii S2 |
6 |
group_2091 |
EHELCC_16065 |
75073 |
76719 |
-1 |
merA |
mercury(II) reductase |
Morganella morganii S2 |
7 |
group_2953 |
EHELCC_16075 |
76964 |
77239 |
-1 |
merP |
mercury resistance system periplasmic binding protein MerP |
Morganella morganii S2 |
8 |
group_363 |
NLDBIP_06650 |
318488 |
321226 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Morganella morganii S4 |
9 |
group_771 |
NLDBIP_07305 |
130188 |
132593 |
-1 |
cadA |
zinc/cadmium/mercury/lead-transporting ATPase |
Morganella morganii S4 |
10 |
group_2953 |
NLDBIP_16290 |
3424 |
3699 |
1 |
merP |
mercury resistance system periplasmic binding protein MerP |
Morganella morganii S4 |
11 |
group_2091 |
NLDBIP_16300 |
3944 |
5590 |
1 |
merA |
mercury(II) reductase |
Morganella morganii S4 |
12 |
group_363 |
LHKJJB_03530 |
296012 |
298750 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Morganella morganii S3 |
13 |
group_771 |
LHKJJB_06840 |
93934 |
96339 |
-1 |
cadA |
zinc/cadmium/mercury/lead-transporting ATPase |
Morganella morganii S3 |
14 |
group_2091 |
LHKJJB_16500 |
75073 |
76719 |
-1 |
merA |
mercury(II) reductase |
Morganella morganii S3 |
15 |
group_2953 |
LHKJJB_16510 |
76964 |
77239 |
-1 |
merP |
mercury resistance system periplasmic binding protein MerP |
Morganella morganii S3 |
16 |
group_771 |
HKOGLL_04090 |
137048 |
139453 |
1 |
cadA |
zinc/cadmium/mercury/lead-transporting ATPase |
Morganella morganii S5 |
17 |
group_363 |
HKOGLL_07005 |
217876 |
220614 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Morganella morganii S5 |
18 |
group_2091 |
HKOGLL_16270 |
75073 |
76719 |
-1 |
merA |
mercury(II) reductase |
Morganella morganii S5 |
19 |
group_2953 |
HKOGLL_16280 |
76964 |
77239 |
-1 |
merP |
mercury resistance system periplasmic binding protein MerP |
Morganella morganii S5 |
20 |
group_363 |
F4V73_RS04945 |
1051231 |
1053717 |
1 |
|
heavy metal translocating P-type ATPase |
Morganella psychrotolerans |
21 |
group_771 |
F4V73_RS11345 |
410447 |
412846 |
-1 |
|
zinc/cadmium/mercury/lead-transporting ATPase |
Morganella psychrotolerans |
22 |
group_363 |
F4V73_RS16200 |
47787 |
50531 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Morganella psychrotolerans |
23 |
group_2953 |
F4V73_RS17000 |
23778 |
23975 |
-1 |
|
heavy-metal-associated domain-containing protein |
Morganella psychrotolerans |
24 |
group_363 |
PMI_RS10710 |
2353322 |
2356276 |
1 |
copA |
copper-exporting P-type ATPase CopA |
Proteus mirabilis HI4320 |
25 |
group_771 |
PMI_RS17915 |
3937417 |
3939759 |
-1 |
|
zinc/cadmium/mercury/lead-transporting ATPase |
Proteus mirabilis HI4320 |