Orthogroup:group_841


Homologs in group_841

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04250 FBDBKF_04250 Morganella morganii S1 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
EHELCC_05540 EHELCC_05540 Morganella morganii S2 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
NLDBIP_05860 NLDBIP_05860 Morganella morganii S4 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
LHKJJB_02740 LHKJJB_02740 Morganella morganii S3 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
HKOGLL_06215 HKOGLL_06215 Morganella morganii S5 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
F4V73_RS08695 F4V73_RS08695 Morganella psychrotolerans ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
PMI_RS10095 PMI_RS10095 Proteus mirabilis HI4320 ampD 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD

Distribution of group_841 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_841 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_841

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_841.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ampD 7

Product

# Product Occurence
1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3023 7 M Cell wall/membrane/envelope biogenesis (M) N-acetyl-anhydromuramyl-L-alanine amidase AmpD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03806 7 N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01510 7 N-acetylmuramoyl-L-alanine amidase

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD 6
N-acetylmuramoyl-L-alanine amidase A 1
N-acetylmuramoyl-L-alanine amidase AmiD 1
Putative N-acetylmuramoyl-L-alanine amidase RC0497 1

Protein length

Min length 180
Max length 190
Mean length (sd) 185.7 (2.9)
Median length 186.0

Protein length distribution