PF00111

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00111
Protein list: lists the 41 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00111
Description 2Fe-2S iron-sulfur cluster binding domain

Occurence in the database

PF00111 is associated with 41 different proteins
The 41 proteins are classified into 6 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_512 FBDBKF_00410 61616 61882 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S1
1 group_598 FBDBKF_01110 207157 207492 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S1
2 group_955 FBDBKF_04560 106905 107912 -1 hcr NADH oxidoreductase Morganella morganii S1
3 group_1310 FBDBKF_07290 139569 140693 -1 ycbX N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain Morganella morganii S1
4 group_2793 FBDBKF_07790 79072 79551 -1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S1
5 group_2058 FBDBKF_15155 41329 42555 1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S1
6 group_598 EHELCC_00435 101376 101711 1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S2
7 group_512 EHELCC_01135 246986 247252 -1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S2
8 group_1310 EHELCC_03680 45493 46617 1 ycbX N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain Morganella morganii S2
9 group_955 EHELCC_05850 166362 167369 -1 hcr NADH oxidoreductase Morganella morganii S2
10 group_2058 EHELCC_11090 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S2
11 group_2793 EHELCC_13620 53266 53745 -1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S2
12 group_512 NLDBIP_02325 432884 433150 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S4
13 group_598 NLDBIP_03025 578425 578760 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S4
14 group_1310 NLDBIP_03680 45289 46413 1 ycbX N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain Morganella morganii S4
15 group_955 NLDBIP_06170 207427 208434 -1 hcr NADH oxidoreductase Morganella morganii S4
16 group_2058 NLDBIP_11435 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S4
17 group_2793 NLDBIP_14065 74141 74620 -1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S4
18 group_955 LHKJJB_03050 184951 185958 -1 hcr NADH oxidoreductase Morganella morganii S3
19 group_512 LHKJJB_03840 40125 40391 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S3
20 group_598 LHKJJB_04540 185666 186001 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S3
21 group_2793 LHKJJB_08785 85129 85608 1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S3
22 group_1310 LHKJJB_09510 45403 46527 1 ycbX N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain Morganella morganii S3
23 group_2058 LHKJJB_11295 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S3
24 group_598 HKOGLL_02505 101581 101916 1 fdx ISC system 2Fe-2S type ferredoxin Morganella morganii S5
25 group_512 HKOGLL_03205 247191 247457 -1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella morganii S5
26 group_955 HKOGLL_06525 106815 107822 -1 hcr NADH oxidoreductase Morganella morganii S5
27 group_2793 HKOGLL_08335 85129 85608 1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella morganii S5
28 group_1310 HKOGLL_09465 144525 145649 -1 ycbX N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain Morganella morganii S5
29 group_2058 HKOGLL_09905 42351 43577 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella morganii S5
30 group_1310 F4V73_RS01475 327988 329115 -1 MOSC domain-containing protein Morganella psychrotolerans
31 group_512 F4V73_RS06390 1334079 1334345 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Morganella psychrotolerans
32 group_598 F4V73_RS07180 1495113 1495451 -1 fdx ISC system 2Fe-2S type ferredoxin Morganella psychrotolerans
33 group_955 F4V73_RS09015 1881788 1882795 -1 hcr NADH oxidoreductase Morganella psychrotolerans
34 group_2058 F4V73_RS12290 42058 43284 -1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Morganella psychrotolerans
35 group_2793 F4V73_RS13255 278255 278734 1 xdhC xanthine dehydrogenase iron sulfur-binding subunit XdhC Morganella psychrotolerans
36 group_2058 PMI_RS01710 406425 407651 1 nqrF NADH:ubiquinone reductase (Na(+)-transporting) subunit F Proteus mirabilis HI4320
37 group_1310 PMI_RS03800 859626 860768 -1 YcbX family protein Proteus mirabilis HI4320
38 group_512 PMI_RS08520 1859023 1859301 1 yfaE class I ribonucleotide reductase maintenance protein YfaE Proteus mirabilis HI4320
39 group_598 PMI_RS09155 1997246 1997581 -1 fdx ISC system 2Fe-2S type ferredoxin Proteus mirabilis HI4320
40 group_955 PMI_RS10400 2282582 2283586 -1 hcr NADH oxidoreductase Proteus mirabilis HI4320