Orthogroup:group_1310



Homologs in group_1310

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08025 FBDBKF_08025 Morganella morganii S1 sfsA DNA/RNA nuclease SfsA
EHELCC_13855 EHELCC_13855 Morganella morganii S2 sfsA DNA/RNA nuclease SfsA
NLDBIP_14300 NLDBIP_14300 Morganella morganii S4 sfsA DNA/RNA nuclease SfsA
LHKJJB_08550 LHKJJB_08550 Morganella morganii S3 sfsA DNA/RNA nuclease SfsA
HKOGLL_08100 HKOGLL_08100 Morganella morganii S5 sfsA DNA/RNA nuclease SfsA
F4V73_RS12965 F4V73_RS12965 Morganella psychrotolerans sfsA DNA/RNA nuclease SfsA
PMI_RS00970 PMI_RS00970 Proteus mirabilis HI4320 sfsA DNA/RNA nuclease SfsA

Distribution of group_1310 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1310 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1310

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1310.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sfsA 7

Product

# Product Occurence
1 DNA/RNA nuclease SfsA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1489 7 GT Carbohydrate transport and metabolism (G)
Signal transduction mechanisms (T)
DNA-binding protein, stimulates sugar fermentation

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06206 7 sugar fermentation stimulation protein A - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03749 7 Sugar fermentation stimulation protein RE domain
PF17746 7 SfsA N-terminal OB domain

Annotations of the 302 SwissProt hits

Annotation Number of occurrences
Sugar fermentation stimulation protein A 42
Sugar fermentation stimulation protein homolog 260

Protein length

Unique protein length 236

Protein length distribution