PF00108

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00108
Protein list: lists the 20 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00108
Description Thiolase, N-terminal domain

Occurence in the database

PF00108 is associated with 20 different proteins
The 20 proteins are classified into 3 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2869 FBDBKF_10610 83454 84635 1 paaJ Acetyl-CoA acetyltransferase Morganella morganii S1
1 group_1970 FBDBKF_14365 73449 74741 -1 fadI acetyl-CoA C-acyltransferase FadI Morganella morganii S1
2 group_2242 FBDBKF_16890 6622 7788 1 fadA acetyl-CoA C-acyltransferase FadA Morganella morganii S1
3 group_1970 EHELCC_07915 42244 43536 1 fadI acetyl-CoA C-acyltransferase FadI Morganella morganii S2
4 group_2869 EHELCC_14945 83444 84625 1 paaJ Acetyl-CoA acetyltransferase Morganella morganii S2
5 group_2242 EHELCC_19540 3670 4836 -1 fadA acetyl-CoA C-acyltransferase FadA Morganella morganii S2
6 group_1970 NLDBIP_08240 42244 43536 1 fadI acetyl-CoA C-acyltransferase FadI Morganella morganii S4
7 group_2869 NLDBIP_14775 83444 84625 1 paaJ Acetyl-CoA acetyltransferase Morganella morganii S4
8 group_2242 NLDBIP_16910 60722 61888 -1 fadA acetyl-CoA C-acyltransferase FadA Morganella morganii S4
9 group_1970 LHKJJB_06025 213623 214915 -1 fadI acetyl-CoA C-acyltransferase FadI Morganella morganii S3
10 group_2869 LHKJJB_14570 57101 58282 -1 paaJ Acetyl-CoA acetyltransferase Morganella morganii S3
11 group_2242 LHKJJB_16560 6622 7788 1 fadA acetyl-CoA C-acyltransferase FadA Morganella morganii S3
12 group_1970 HKOGLL_04890 26835 28127 1 fadI acetyl-CoA C-acyltransferase FadI Morganella morganii S5
13 group_2869 HKOGLL_13190 57101 58282 -1 paaJ Acetyl-CoA acetyltransferase Morganella morganii S5
14 group_2242 HKOGLL_17525 6622 7788 1 fadA acetyl-CoA C-acyltransferase FadA Morganella morganii S5
15 group_1970 F4V73_RS02540 535785 537077 1 fadI acetyl-CoA C-acyltransferase FadI Morganella psychrotolerans
16 group_2869 F4V73_RS14320 85998 87182 1 acetyl-CoA C-acetyltransferase Morganella psychrotolerans
17 group_2242 F4V73_RS18360 6750 7916 1 fadA acetyl-CoA C-acyltransferase FadA Morganella psychrotolerans
18 group_1970 PMI_RS08865 1938811 1940115 -1 fadI acetyl-CoA C-acyltransferase FadI Proteus mirabilis HI4320
19 group_2242 PMI_RS17635 3868809 3869972 -1 fadA acetyl-CoA C-acyltransferase FadA Proteus mirabilis HI4320