Orthogroup:group_2242



Homologs in group_2242

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17160 FBDBKF_17160 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_01730 EHELCC_01730 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_01730 NLDBIP_01730 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_00305 LHKJJB_00305 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_00345 HKOGLL_00345 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS05915 F4V73_RS05915 Morganella psychrotolerans - XRE family transcriptional regulator
PMI_RS08320 PMI_RS08320 Proteus mirabilis HI4320 - XRE family transcriptional regulator

Distribution of group_2242 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2242 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2242

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2242.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hipB 5
2 - 2

Product

# Product Occurence
1 Transcriptional regulator, contains XRE-family HTH domain 5
2 XRE family transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1396 7 K Transcription (K) Transcriptional regulator, contains XRE-family HTH domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K23779 7 XRE family transcriptional regulator, regulator of sulfur utilization - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01381 7 Helix-turn-helix

Annotations of the 9 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator DdrOC 1
HTH-type transcriptional regulator DdrOP3 1
HTH-type transcriptional regulator SinR 2
HTH-type transcriptional regulator SutR 1
Transcriptional regulator ClgR 3
Uncharacterized HTH-type transcriptional regulator y4dJ 1

Protein length

Min length 185
Max length 186
Mean length (sd) 185.1 (0.4)
Median length 185.0

Protein length distribution