PF00006

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00006
Protein list: lists the 36 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00006
Description ATP synthase alpha/beta family, nucleotide-binding domain

Occurence in the database

PF00006 is associated with 36 different proteins
The 36 proteins are classified into 5 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_205 FBDBKF_00605 100567 101931 1 fliI flagellar protein export ATPase FliI Morganella morganii S1
1 group_1384 FBDBKF_08215 20281 21540 1 rho transcription termination factor Rho Morganella morganii S1
2 group_431 FBDBKF_09330 96475 97767 -1 sctN type III secretion system ATPase SctN Morganella morganii S1
3 group_2109 FBDBKF_15485 21378 22919 1 atpA F0F1 ATP synthase subunit alpha Morganella morganii S1
4 group_2111 FBDBKF_15495 23872 25254 1 atpD F0F1 ATP synthase subunit beta Morganella morganii S1
5 group_205 EHELCC_00940 206937 208301 -1 fliI flagellar protein export ATPase FliI Morganella morganii S2
6 group_431 EHELCC_10080 48337 49629 1 sctN type III secretion system ATPase SctN Morganella morganii S2
7 group_1384 EHELCC_13310 142185 143444 -1 rho transcription termination factor Rho Morganella morganii S2
8 group_2109 EHELCC_15845 20678 22219 1 atpA F0F1 ATP synthase subunit alpha Morganella morganii S2
9 group_2111 EHELCC_15855 23172 24554 1 atpD F0F1 ATP synthase subunit beta Morganella morganii S2
10 group_205 NLDBIP_02520 471835 473199 1 fliI flagellar protein export ATPase FliI Morganella morganii S4
11 group_431 NLDBIP_10425 26608 27900 1 sctN type III secretion system ATPase SctN Morganella morganii S4
12 group_1384 NLDBIP_13650 142185 143444 -1 rho transcription termination factor Rho Morganella morganii S4
13 group_2111 NLDBIP_16515 56109 57491 -1 atpD F0F1 ATP synthase subunit beta Morganella morganii S4
14 group_2109 NLDBIP_16525 58444 59985 -1 atpA F0F1 ATP synthase subunit alpha Morganella morganii S4
15 group_205 LHKJJB_04035 79076 80440 1 fliI flagellar protein export ATPase FliI Morganella morganii S3
16 group_431 LHKJJB_10930 163628 164920 -1 sctN type III secretion system ATPase SctN Morganella morganii S3
17 group_1384 LHKJJB_12905 18999 20258 1 rho transcription termination factor Rho Morganella morganii S3
18 group_2109 LHKJJB_16280 20678 22219 1 atpA F0F1 ATP synthase subunit alpha Morganella morganii S3
19 group_2111 LHKJJB_16290 23172 24554 1 atpD F0F1 ATP synthase subunit beta Morganella morganii S3
20 group_205 HKOGLL_03010 207142 208506 -1 fliI flagellar protein export ATPase FliI Morganella morganii S5
21 group_1384 HKOGLL_12125 142185 143444 -1 rho transcription termination factor Rho Morganella morganii S5
22 group_431 HKOGLL_13990 96929 98221 -1 sctN type III secretion system ATPase SctN Morganella morganii S5
23 group_2109 HKOGLL_16050 20678 22219 1 atpA F0F1 ATP synthase subunit alpha Morganella morganii S5
24 group_2111 HKOGLL_16060 23172 24554 1 atpD F0F1 ATP synthase subunit beta Morganella morganii S5
25 group_205 F4V73_RS06615 1377484 1378848 1 fliI flagellar protein export ATPase FliI Morganella psychrotolerans
26 group_205 F4V73_RS08315 1723851 1725170 1 FliI/YscN family ATPase Morganella psychrotolerans
27 group_431 F4V73_RS10635 257461 258753 1 sctN type III secretion system ATPase SctN Morganella psychrotolerans
28 group_2111 F4V73_RS17650 171887 173269 -1 atpD F0F1 ATP synthase subunit beta Morganella psychrotolerans
29 group_2109 F4V73_RS17660 174221 175762 -1 atpA F0F1 ATP synthase subunit alpha Morganella psychrotolerans
30 group_1384 F4V73_RS18765 21442 22701 1 rho transcription termination factor Rho Morganella psychrotolerans
31 group_205 PMI_RS07975 1746683 1748056 1 fliI flagellar protein export ATPase FliI Proteus mirabilis HI4320
32 group_431 PMI_RS13265 2943068 2944366 -1 sctN type III secretion system ATPase SctN Proteus mirabilis HI4320
33 group_2109 PMI_RS15165 3364028 3365569 1 atpA F0F1 ATP synthase subunit alpha Proteus mirabilis HI4320
34 group_2111 PMI_RS15175 3366525 3367907 1 atpD F0F1 ATP synthase subunit beta Proteus mirabilis HI4320
35 group_1384 PMI_RS16475 3633442 3634701 1 rho transcription termination factor Rho Proteus mirabilis HI4320