Orthogroup:group_2111


Homologs in group_2111

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15870 FBDBKF_15870 Morganella morganii S1 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP
EHELCC_18470 EHELCC_18470 Morganella morganii S2 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP
NLDBIP_17305 NLDBIP_17305 Morganella morganii S4 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP
LHKJJB_17355 LHKJJB_17355 Morganella morganii S3 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP
HKOGLL_17040 HKOGLL_17040 Morganella morganii S5 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP
F4V73_RS16440 F4V73_RS16440 Morganella psychrotolerans clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP
PMI_RS00555 PMI_RS00555 Proteus mirabilis HI4320 clpP ATP-dependent Clp endopeptidase proteolytic subunit ClpP

Distribution of group_2111 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2111 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2111

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2111.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 clpP 7

Product

# Product Occurence
1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0740 7 O Posttranslational modification, protein turnover, chaperones (O) ATP-dependent protease ClpP, protease subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01358 7 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Cell cycle - Caulobacter
Longevity regulating pathway - worm		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00574 7 Clp protease

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG000077 7 ATP-dependent Clp protease proteolytic subunit VF0074 Stress survival

Annotations of the 506 SwissProt hits

Annotation Number of occurrences
ATP-dependent Clp protease proteolytic subunit 424
ATP-dependent Clp protease proteolytic subunit 1 38
ATP-dependent Clp protease proteolytic subunit 2 33
ATP-dependent Clp protease proteolytic subunit 2, mitochondrial 1
ATP-dependent Clp protease proteolytic subunit 3 6
ATP-dependent Clp protease proteolytic subunit 4 1
ATP-dependent Clp protease proteolytic subunit, mitochondrial 3

Protein length

Min length 206
Max length 207
Mean length (sd) 206.1 (0.4)
Median length 206.0

Protein length distribution