COG4166
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4166, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 21 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
ABC-type oligopeptide transport system, periplasmic component |
Function(s) descr. |
Amino acid transport and metabolism (E) |
Occurence in the database
COG4166 is associated with 21 different proteins (see tab "Protein list" and "Profile") |
The 21 proteins are classified into 1 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_9 |
FBDBKF_05295 |
63660 |
65306 |
-1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Morganella morganii S1 |
1 |
group_9 |
FBDBKF_05300 |
65428 |
67059 |
-1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S1 |
2 |
group_9 |
FBDBKF_05570 |
121453 |
123087 |
-1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S1 |
3 |
group_9 |
EHELCC_12020 |
58407 |
60041 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S2 |
4 |
group_9 |
EHELCC_12290 |
114435 |
116066 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S2 |
5 |
group_9 |
EHELCC_12295 |
116188 |
117834 |
1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Morganella morganii S2 |
6 |
group_9 |
NLDBIP_12360 |
58362 |
59996 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S4 |
7 |
group_9 |
NLDBIP_12630 |
114390 |
116021 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S4 |
8 |
group_9 |
NLDBIP_12635 |
116143 |
117789 |
1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Morganella morganii S4 |
9 |
group_9 |
LHKJJB_12220 |
58407 |
60041 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S3 |
10 |
group_9 |
LHKJJB_12490 |
114435 |
116066 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S3 |
11 |
group_9 |
LHKJJB_12495 |
116188 |
117834 |
1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Morganella morganii S3 |
12 |
group_9 |
HKOGLL_10835 |
58407 |
60041 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S5 |
13 |
group_9 |
HKOGLL_11105 |
114435 |
116066 |
1 |
oppA |
ABC-type oligopeptide transport system, periplasmic component |
Morganella morganii S5 |
14 |
group_9 |
HKOGLL_11110 |
116188 |
117834 |
1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Morganella morganii S5 |
15 |
group_9 |
F4V73_RS03735 |
792389 |
793945 |
1 |
|
peptide ABC transporter substrate-binding protein |
Morganella psychrotolerans |
16 |
group_9 |
F4V73_RS05750 |
1220423 |
1222063 |
-1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Morganella psychrotolerans |
17 |
group_9 |
F4V73_RS05755 |
1222185 |
1223816 |
-1 |
|
ABC transporter substrate-binding protein |
Morganella psychrotolerans |
18 |
group_9 |
PMI_RS06600 |
1445339 |
1446958 |
-1 |
|
peptide ABC transporter substrate-binding protein |
Proteus mirabilis HI4320 |
19 |
group_9 |
PMI_RS07140 |
1558636 |
1560273 |
-1 |
oppA |
oligopeptide ABC transporter substrate-binding protein OppA |
Proteus mirabilis HI4320 |
20 |
group_9 |
PMI_RS07145 |
1560540 |
1562180 |
-1 |
|
ABC transporter substrate-binding protein |
Proteus mirabilis HI4320 |