COG4166


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG4166, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type oligopeptide transport system, periplasmic component
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG4166 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_9 FBDBKF_05295 63660 65306 -1 oppA oligopeptide ABC transporter substrate-binding protein OppA Morganella morganii S1
1 group_9 FBDBKF_05300 65428 67059 -1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S1
2 group_9 FBDBKF_05570 121453 123087 -1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S1
3 group_9 EHELCC_12020 58407 60041 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S2
4 group_9 EHELCC_12290 114435 116066 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S2
5 group_9 EHELCC_12295 116188 117834 1 oppA oligopeptide ABC transporter substrate-binding protein OppA Morganella morganii S2
6 group_9 NLDBIP_12360 58362 59996 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S4
7 group_9 NLDBIP_12630 114390 116021 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S4
8 group_9 NLDBIP_12635 116143 117789 1 oppA oligopeptide ABC transporter substrate-binding protein OppA Morganella morganii S4
9 group_9 LHKJJB_12220 58407 60041 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S3
10 group_9 LHKJJB_12490 114435 116066 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S3
11 group_9 LHKJJB_12495 116188 117834 1 oppA oligopeptide ABC transporter substrate-binding protein OppA Morganella morganii S3
12 group_9 HKOGLL_10835 58407 60041 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S5
13 group_9 HKOGLL_11105 114435 116066 1 oppA ABC-type oligopeptide transport system, periplasmic component Morganella morganii S5
14 group_9 HKOGLL_11110 116188 117834 1 oppA oligopeptide ABC transporter substrate-binding protein OppA Morganella morganii S5
15 group_9 F4V73_RS03735 792389 793945 1 peptide ABC transporter substrate-binding protein Morganella psychrotolerans
16 group_9 F4V73_RS05750 1220423 1222063 -1 oppA oligopeptide ABC transporter substrate-binding protein OppA Morganella psychrotolerans
17 group_9 F4V73_RS05755 1222185 1223816 -1 ABC transporter substrate-binding protein Morganella psychrotolerans
18 group_9 PMI_RS06600 1445339 1446958 -1 peptide ABC transporter substrate-binding protein Proteus mirabilis HI4320
19 group_9 PMI_RS07140 1558636 1560273 -1 oppA oligopeptide ABC transporter substrate-binding protein OppA Proteus mirabilis HI4320
20 group_9 PMI_RS07145 1560540 1562180 -1 ABC transporter substrate-binding protein Proteus mirabilis HI4320