COG3209


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3209, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 33 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein RhaS, contains 28 RHS repeats
Function(s) descr. General function prediction only (R)

Occurence in the database

COG3209 is associated with 33 different proteins (see tab "Protein list" and "Profile")
The 33 proteins are classified into 7 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2485 FBDBKF_01285 247669 248247 -1 RHS repeat protein Morganella morganii S1
1 group_160 FBDBKF_13030 111669 114224 -1 RHS repeat domain-containing protein Morganella morganii S1
2 group_3414 FBDBKF_13680 9100 11898 -1 Insecticidal toxin E Morganella morganii S1
3 group_3415 FBDBKF_13685 11910 13253 -1 Rhs-family protein Morganella morganii S1
4 group_160 FBDBKF_20435 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S1
5 group_2485 EHELCC_00260 60621 61199 1 RHS repeat protein Morganella morganii S2
6 group_160 EHELCC_06345 281701 284256 -1 RHS repeat domain-containing protein Morganella morganii S2
7 group_3414 EHELCC_11350 93976 96774 -1 Insecticidal toxin E Morganella morganii S2
8 group_3415 EHELCC_11355 96786 98129 -1 Rhs-family protein Morganella morganii S2
9 group_160 EHELCC_19745 12 2585 1 RHS repeat domain-containing protein Morganella morganii S2
10 group_2485 NLDBIP_03200 618937 619515 -1 RHS repeat protein Morganella morganii S4
11 group_160 NLDBIP_06665 322766 325321 -1 RHS repeat domain-containing protein Morganella morganii S4
12 group_3414 NLDBIP_11695 93976 96774 -1 Insecticidal toxin E Morganella morganii S4
13 group_3415 NLDBIP_11700 96786 98129 -1 Rhs-family protein Morganella morganii S4
14 group_160 NLDBIP_19760 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S4
15 group_160 LHKJJB_03545 300290 302845 -1 RHS repeat domain-containing protein Morganella morganii S3
16 group_2485 LHKJJB_04715 226178 226756 -1 RHS repeat protein Morganella morganii S3
17 group_3414 LHKJJB_11555 93976 96774 -1 Insecticidal toxin E Morganella morganii S3
18 group_3415 LHKJJB_11560 96786 98129 -1 Rhs-family protein Morganella morganii S3
19 group_160 LHKJJB_19725 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S3
20 group_2485 HKOGLL_02330 60826 61404 1 RHS repeat protein Morganella morganii S5
21 group_160 HKOGLL_07020 222154 224709 -1 RHS repeat domain-containing protein Morganella morganii S5
22 group_3414 HKOGLL_10165 93976 96774 -1 Insecticidal toxin E Morganella morganii S5
23 group_3415 HKOGLL_10170 96786 98129 -1 Rhs-family protein Morganella morganii S5
24 group_160 HKOGLL_19640 589 3162 -1 RHS repeat domain-containing protein Morganella morganii S5
25 group_4014 F4V73_RS04230 895072 895935 1 hypothetical protein Morganella psychrotolerans
26 group_2485 PMI_RS03745 843162 845711 1 RHS repeat protein Proteus mirabilis HI4320
27 group_3689 PMI_RS19585 1135753 1136037 -1 RHS domain-containing protein Proteus mirabilis HI4320
28 group_3689 PMI_RS05220 1138955 1142842 -1 PAAR domain-containing protein Proteus mirabilis HI4320
29 group_3697 PMI_RS05435 1189744 1194855 1 RHS repeat-associated core domain-containing protein Proteus mirabilis HI4320
30 group_3697 PMI_RS05455 1196255 1197397 1 RHS repeat-associated core domain-containing protein Proteus mirabilis HI4320
31 group_3697 PMI_RS19260 1198047 1199657 1 RHS repeat-associated core domain-containing protein Proteus mirabilis HI4320
32 group_3697 PMI_RS19270 1206547 1207938 1 RHS repeat-associated core domain-containing protein Proteus mirabilis HI4320