COG3209
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3209, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 33 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Uncharacterized conserved protein RhaS, contains 28 RHS repeats |
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Function(s) descr. | General function prediction only (R) |
Occurence in the database
COG3209 is associated with 33 different proteins (see tab "Protein list" and "Profile") |
The 33 proteins are classified into 7 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_2485 | FBDBKF_01285 | 247669 | 248247 | -1 | RHS repeat protein | Morganella morganii S1 | |
1 | group_160 | FBDBKF_13030 | 111669 | 114224 | -1 | RHS repeat domain-containing protein | Morganella morganii S1 | |
2 | group_3414 | FBDBKF_13680 | 9100 | 11898 | -1 | Insecticidal toxin E | Morganella morganii S1 | |
3 | group_3415 | FBDBKF_13685 | 11910 | 13253 | -1 | Rhs-family protein | Morganella morganii S1 | |
4 | group_160 | FBDBKF_20435 | 589 | 3162 | -1 | RHS repeat domain-containing protein | Morganella morganii S1 | |
5 | group_2485 | EHELCC_00260 | 60621 | 61199 | 1 | RHS repeat protein | Morganella morganii S2 | |
6 | group_160 | EHELCC_06345 | 281701 | 284256 | -1 | RHS repeat domain-containing protein | Morganella morganii S2 | |
7 | group_3414 | EHELCC_11350 | 93976 | 96774 | -1 | Insecticidal toxin E | Morganella morganii S2 | |
8 | group_3415 | EHELCC_11355 | 96786 | 98129 | -1 | Rhs-family protein | Morganella morganii S2 | |
9 | group_160 | EHELCC_19745 | 12 | 2585 | 1 | RHS repeat domain-containing protein | Morganella morganii S2 | |
10 | group_2485 | NLDBIP_03200 | 618937 | 619515 | -1 | RHS repeat protein | Morganella morganii S4 | |
11 | group_160 | NLDBIP_06665 | 322766 | 325321 | -1 | RHS repeat domain-containing protein | Morganella morganii S4 | |
12 | group_3414 | NLDBIP_11695 | 93976 | 96774 | -1 | Insecticidal toxin E | Morganella morganii S4 | |
13 | group_3415 | NLDBIP_11700 | 96786 | 98129 | -1 | Rhs-family protein | Morganella morganii S4 | |
14 | group_160 | NLDBIP_19760 | 589 | 3162 | -1 | RHS repeat domain-containing protein | Morganella morganii S4 | |
15 | group_160 | LHKJJB_03545 | 300290 | 302845 | -1 | RHS repeat domain-containing protein | Morganella morganii S3 | |
16 | group_2485 | LHKJJB_04715 | 226178 | 226756 | -1 | RHS repeat protein | Morganella morganii S3 | |
17 | group_3414 | LHKJJB_11555 | 93976 | 96774 | -1 | Insecticidal toxin E | Morganella morganii S3 | |
18 | group_3415 | LHKJJB_11560 | 96786 | 98129 | -1 | Rhs-family protein | Morganella morganii S3 | |
19 | group_160 | LHKJJB_19725 | 589 | 3162 | -1 | RHS repeat domain-containing protein | Morganella morganii S3 | |
20 | group_2485 | HKOGLL_02330 | 60826 | 61404 | 1 | RHS repeat protein | Morganella morganii S5 | |
21 | group_160 | HKOGLL_07020 | 222154 | 224709 | -1 | RHS repeat domain-containing protein | Morganella morganii S5 | |
22 | group_3414 | HKOGLL_10165 | 93976 | 96774 | -1 | Insecticidal toxin E | Morganella morganii S5 | |
23 | group_3415 | HKOGLL_10170 | 96786 | 98129 | -1 | Rhs-family protein | Morganella morganii S5 | |
24 | group_160 | HKOGLL_19640 | 589 | 3162 | -1 | RHS repeat domain-containing protein | Morganella morganii S5 | |
25 | group_4014 | F4V73_RS04230 | 895072 | 895935 | 1 | hypothetical protein | Morganella psychrotolerans | |
26 | group_2485 | PMI_RS03745 | 843162 | 845711 | 1 | RHS repeat protein | Proteus mirabilis HI4320 | |
27 | group_3689 | PMI_RS19585 | 1135753 | 1136037 | -1 | RHS domain-containing protein | Proteus mirabilis HI4320 | |
28 | group_3689 | PMI_RS05220 | 1138955 | 1142842 | -1 | PAAR domain-containing protein | Proteus mirabilis HI4320 | |
29 | group_3697 | PMI_RS05435 | 1189744 | 1194855 | 1 | RHS repeat-associated core domain-containing protein | Proteus mirabilis HI4320 | |
30 | group_3697 | PMI_RS05455 | 1196255 | 1197397 | 1 | RHS repeat-associated core domain-containing protein | Proteus mirabilis HI4320 | |
31 | group_3697 | PMI_RS19260 | 1198047 | 1199657 | 1 | RHS repeat-associated core domain-containing protein | Proteus mirabilis HI4320 | |
32 | group_3697 | PMI_RS19270 | 1206547 | 1207938 | 1 | RHS repeat-associated core domain-containing protein | Proteus mirabilis HI4320 |