Orthogroup:group_23


Homologs in group_23

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19 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20020 FBDBKF_20020 Morganella morganii S1 - Molecular chaperone
FBDBKF_20060 FBDBKF_20060 Morganella morganii S1 - Fimbria/pilus periplasmic chaperone
EHELCC_03470 EHELCC_03470 Morganella morganii S2 - Fimbria/pilus periplasmic chaperone
EHELCC_03510 EHELCC_03510 Morganella morganii S2 - Molecular chaperone
NLDBIP_03470 NLDBIP_03470 Morganella morganii S4 - Fimbria/pilus periplasmic chaperone
NLDBIP_03510 NLDBIP_03510 Morganella morganii S4 - Molecular chaperone
LHKJJB_09300 LHKJJB_09300 Morganella morganii S3 - Fimbria/pilus periplasmic chaperone
LHKJJB_09340 LHKJJB_09340 Morganella morganii S3 - Molecular chaperone
HKOGLL_09635 HKOGLL_09635 Morganella morganii S5 - Molecular chaperone
HKOGLL_09675 HKOGLL_09675 Morganella morganii S5 - Fimbria/pilus periplasmic chaperone
PMI_RS05730 PMI_RS05730 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS05770 PMI_RS05770 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS07100 PMI_RS07100 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone
PMI_RS10905 PMI_RS10905 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS12535 PMI_RS12535 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS12550 PMI_RS12550 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS13450 PMI_RS13450 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone
PMI_RS15275 PMI_RS15275 Proteus mirabilis HI4320 - fimbria/pilus chaperone family protein
PMI_RS17125 PMI_RS17125 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of group_23 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_23 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_23

Orthogroup content: 19 members

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This page summarizes the annotation of all members of the orthologous group group_23.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 19

Product

# Product Occurence
1 Molecular chaperone 5
2 Fimbria/pilus periplasmic chaperone 5
3 molecular chaperone 5
4 fimbria/pilus periplasmic chaperone 3
5 fimbria/pilus chaperone family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3121 19 W Extracellular structures (W) P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07346 12 fimbrial chaperone protein Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00345 19 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 17 Pili assembly chaperone PapD, C-terminal domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042714 1 fimbria/pilus periplasmic chaperone VF1153 Adherence

Annotations of the 40 SwissProt hits

Annotation Number of occurrences
Chaperone protein AfaB 1
Chaperone protein AggD 1
Chaperone protein CS3-1 1
Chaperone protein ClpE 1
Chaperone protein CssC 2
Chaperone protein FaeE 1
Chaperone protein FanE 1
Chaperone protein FimB/FhaD 1
Chaperone protein FimC 3
Chaperone protein FocC 2
Chaperone protein HifB 2
Chaperone protein LpfB 1
Chaperone protein MrkB 1
Chaperone protein MyfB 1
Chaperone protein NfaE 1
Chaperone protein PapD 1
Chaperone protein PmfD 1
Chaperone protein PrsD (Fragment) 1
Chaperone protein PsaB 2
Chaperone protein SefB 1
Chaperone protein caf1M 1
Probable fimbrial chaperone LpfB 1
Probable fimbrial chaperone SfmC 1
Probable fimbrial chaperone YadV 1
Probable fimbrial chaperone YehC 1
Probable fimbrial chaperone YfcS 1
Probable fimbrial chaperone YraI 1
Probable fimbrial chaperone protein ElfD 2
Protein FasE 1
Uncharacterized fimbrial chaperone YbgP 1
Uncharacterized fimbrial chaperone YcbF 1
Uncharacterized fimbrial chaperone YhcA 1
Uncharacterized fimbrial chaperone YqiH 1

Protein length

Min length 221
Max length 238
Mean length (sd) 230.7 (4.2)
Median length 232.0

Protein length distribution