Homologs in group_3689

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS06955 F4V73_RS06955 37.0 Morganella psychrotolerans - PAAR domain-containing protein
PMI_RS19600 PMI_RS19600 92.3 Proteus mirabilis HI4320 - hypothetical protein
PMI_RS05220 PMI_RS05220 96.8 Proteus mirabilis HI4320 - PAAR domain-containing protein

Distribution of the homologs in the orthogroup group_3689

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3689

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS19585
Feature type CDS
Gene -
Product RHS domain-containing protein
Location 1135753 - 1136037 (strand: -1)
Length 285 (nucleotides) / 94 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3689
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF03527 RHS protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3209 General function prediction only (R) R Uncharacterized conserved protein RhaS, contains 28 RHS repeats

Protein Sequence

MKQSSGFHYYWHHCDINSAPLEVTNAQGNTLWSGKYKRFGFVRNSPLSFYSDPERVMASFEQNLCYAGQYFDNDKFVGNKFEQRLRWPVGRVSG

Flanking regions ( +/- flanking 50bp)

AAACTTATTGCTATGAAGAGCACGGCAGTTATACCCCTCTTGCCGTTATCGTGAAACAATCCAGTGGTTTTCATTATTACTGGCACCACTGCGATATTAACAGCGCCCCACTTGAAGTCACCAATGCACAAGGCAATACGCTATGGTCAGGAAAATATAAACGCTTTGGCTTTGTTCGCAATAGCCCATTAAGTTTCTACTCTGACCCTGAACGTGTGATGGCCTCCTTTGAGCAAAACTTATGCTATGCCGGACAGTATTTTGACAATGACAAATTTGTCGGGAACAAATTTGAACAGCGCTTGCGCTGGCCCGTAGGGCGAGTATCAGGATGATACGAGTATTCAGGATTACATTTTAATACCTTTAGATTCTACGACCCACA