Homologs in group_3689

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS06955 F4V73_RS06955 47.9 Morganella psychrotolerans - PAAR domain-containing protein
PMI_RS19585 PMI_RS19585 96.8 Proteus mirabilis HI4320 - RHS domain-containing protein
PMI_RS19600 PMI_RS19600 84.6 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3689

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3689

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0DUH5 3.59e-179 571 32 27 1297 1 dddA Double-stranded DNA deaminase toxin A Burkholderia cenocepacia (strain H111)
P16919 3.83e-48 192 28 29 812 2 rhsD Protein RhsD Escherichia coli (strain K12)
P16919 9.55e-06 54 21 9 357 2 rhsD Protein RhsD Escherichia coli (strain K12)
Q9I0F4 7.28e-48 191 24 39 1154 4 tse5 Toxin protein Tse5 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
E0SAK8 1.13e-46 187 24 51 1285 1 rhsA Probable deoxyribonuclease RhsA Dickeya dadantii (strain 3937)
E0SIS2 1.27e-45 184 23 45 1285 1 rhsB Probable deoxyribonuclease RhsB Dickeya dadantii (strain 3937)
P16918 1.66e-38 161 24 48 1164 1 rhsC Protein RhsC Escherichia coli (strain K12)
P16917 4.19e-38 159 24 49 1164 3 rhsB Protein RhsB Escherichia coli (strain K12)
P16916 4.19e-38 159 24 49 1164 3 rhsA Protein RhsA Escherichia coli (strain K12)
E0SGL7 1.11e-27 125 23 26 775 1 rhsC Putative deoxyribonuclease RhsC Dickeya dadantii (strain 3937)
A8GG78 6.48e-20 97 38 4 186 1 tre1 NAD(+)--protein-arginine ADP-ribosyltransferase Tre1 Serratia proteamaculans (strain 568)
P24211 3.91e-14 80 28 14 341 5 rhsE Putative protein RhsE Escherichia coli (strain K12)
G4NYJ6 7.85e-12 74 22 24 596 1 wapA tRNA3(Ser)-specific nuclease WapA Bacillus spizizenii (strain DSM 15029 / JCM 12233 / NBRC 101239 / NRRL B-23049 / TU-B-10)
G4NYJ6 7.59e-11 70 21 13 450 1 wapA tRNA3(Ser)-specific nuclease WapA Bacillus spizizenii (strain DSM 15029 / JCM 12233 / NBRC 101239 / NRRL B-23049 / TU-B-10)
G4NYJ6 3.09e-07 59 22 10 287 1 wapA tRNA3(Ser)-specific nuclease WapA Bacillus spizizenii (strain DSM 15029 / JCM 12233 / NBRC 101239 / NRRL B-23049 / TU-B-10)
G4NYJ6 5.96e-07 58 21 20 522 1 wapA tRNA3(Ser)-specific nuclease WapA Bacillus spizizenii (strain DSM 15029 / JCM 12233 / NBRC 101239 / NRRL B-23049 / TU-B-10)
Q07833 1.81e-11 73 21 17 522 1 wapA tRNA nuclease WapA Bacillus subtilis (strain 168)
Q07833 7.84e-10 67 23 24 551 1 wapA tRNA nuclease WapA Bacillus subtilis (strain 168)
Q07833 2.89e-08 62 22 21 474 1 wapA tRNA nuclease WapA Bacillus subtilis (strain 168)
Q07833 1.47e-06 57 21 10 287 1 wapA tRNA nuclease WapA Bacillus subtilis (strain 168)
D4G3R4 1.36e-10 70 21 17 522 1 wapA tRNA(Glu)-specific nuclease WapA Bacillus subtilis subsp. natto (strain BEST195)
D4G3R4 4.57e-10 68 23 24 551 1 wapA tRNA(Glu)-specific nuclease WapA Bacillus subtilis subsp. natto (strain BEST195)
D4G3R4 1.71e-06 56 24 3 171 1 wapA tRNA(Glu)-specific nuclease WapA Bacillus subtilis subsp. natto (strain BEST195)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05220
Feature type CDS
Gene -
Product PAAR domain-containing protein
Location 1138955 - 1142842 (strand: -1)
Length 3888 (nucleotides) / 1295 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3689
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF03527 RHS protein
PF05488 PAAR motif
PF05593 RHS Repeat
PF20148 Domain of unknown function (DUF6531)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3209 General function prediction only (R) R Uncharacterized conserved protein RhaS, contains 28 RHS repeats

Protein Sequence

MDMDEYLAIEFSTKGIITMLEAARVGDIIGHSKSMWGMLVGTLLGAAIAIGGAMISGVLMGAGIAASCIGIGVLAIGASIAVGYGTTLLADWVRDKCVETGSKSLSPCGEILDGSKNVRINGKPAAMSTRSNVKCDKENSERQIAQGSGSVYINGFPASRVGDKTTCDATIMEGSPNVRIGGGTQATEDIEPEIPSWVTTASDLTMLFAGFLSFGSAAAKGPGAVAKLWNKLPGSAKISRFACRYGKIFTGLSLAIPAIGILTRPVEVIGGQKILNDEDELDFSYEAELPLYWQRNYLSSYCYEGALGRGWSFFWESQLIKSEDGFVWQNLSGDILPFPDIPLGHRNFNEAAQGWIIHHEDDSWTFQDAGELRYHYPPFDDKGYSRLSHIVDNVGNEQRFHYNEHHQLIHITGCGDLNIECEYQSFQLAEKTVSRLTAVYQVNPHQIRRRLCAYFYNESAQLIRVEQQTDHPYRQFGWTDAGVMAWHSDKYGLRSEYRWALSEDNLWQVIENKTSEGESYRLEYDDINLTRTAYWHDGSTSFWQLNHDHQIIHYTDRTGIKTALIWDEFGLPCGCRNALGHTHISEWDALGRLLSITDGNGNQTRWQYQNERERLITVFWPDNTESRLAYDSLGRLIKEISPLHQITEYRYDFKTTLRPTIRIDAKQGRSEFLWNKRGQLLRHTDCSGKQHIWCYDDEGRVVSQTNALQEATEYQYDEVGHLTRIILPDNSTVQLAWNAAGLLTHHQRNDNTPCQWQYNAFGRVTTEIDKLARHIHYHYNAQGALISIENANGGRYLLNRDAEGRLVEEIRPDETLLQYTYNVAGRLVEEAHLGDRVFTSAPRTILLDYDAAGNLAKRETLTDRYQYQWDSMNRLLVASKQPNQRGLEMGLQANQVHFTYDALGRIIREQTGDDIVEFNYDELNNLSRLTLPQGDSLNWLYYGSGHATAINHLVDSRSQLLTEFERDDLHREISRTQGELTQYRQYDKLGRTISTFSSRDKQHPLNGITLWRKWFYDPQDNLGAMEDTYRGWVEYLYDSEQRLKKVASSENLDAMLFYDRADNLLERPQSEMDAEHSPTLALSPQGDKLRQFQGWHYQYDAYGNVIARRYRNQSPQTYAYDGDNRLVIAHNQGIKAQYHYDALGRRIHKTVENRESGQVKRQETHFIWQGLRLLQEQDLNTGKHQTYCYEEHGSYTPLAVIVKQSSGFHYYWHHCDINSAPLEVTNAQGNTLWSGKYERFGFVRNSPLSFYSDPERVMASFEQNLRYAGQYFDNDKFVGNKFEQRLRWPVGRVSG

Flanking regions ( +/- flanking 50bp)

CAAGTTCTTATATTTACCATGTCCTCGCCACACGCTTTTAATGATACACAATGGACATGGATGAATACCTTGCTATCGAGTTTTCAACCAAGGGGATAATCACTATGTTAGAGGCGGCAAGGGTTGGAGATATTATCGGTCACTCAAAATCGATGTGGGGGATGCTTGTCGGTACCCTATTAGGAGCTGCTATCGCCATCGGTGGCGCCATGATTTCTGGTGTATTAATGGGTGCGGGTATTGCTGCAAGCTGCATTGGTATTGGCGTGCTTGCCATTGGTGCTTCCATTGCCGTCGGTTACGGAACTACCCTATTAGCCGACTGGGTTCGGGATAAATGTGTTGAAACAGGTTCAAAATCCTTAAGCCCCTGTGGGGAAATCCTTGACGGCTCCAAAAATGTTCGTATTAACGGCAAGCCTGCCGCAATGTCTACCCGTAGCAACGTCAAATGTGATAAAGAAAACAGTGAACGCCAAATCGCTCAAGGCTCGGGTAGTGTCTATATCAACGGTTTTCCAGCCTCTCGGGTCGGTGATAAAACCACCTGTGATGCGACTATCATGGAAGGTTCCCCCAATGTCCGGATTGGCGGTGGAACACAAGCAACCGAAGATATTGAACCTGAAATTCCCTCTTGGGTTACCACCGCATCCGATCTCACGATGTTATTTGCCGGTTTCCTGAGTTTTGGTTCAGCGGCAGCCAAAGGCCCCGGGGCAGTAGCGAAGTTGTGGAACAAATTACCGGGTAGTGCCAAAATAAGTCGCTTTGCTTGTCGTTATGGAAAAATTTTTACTGGGCTTAGTCTCGCTATTCCGGCCATTGGCATCTTAACCCGCCCTGTTGAAGTGATTGGCGGACAAAAAATCCTCAATGACGAGGATGAATTGGATTTTAGCTATGAGGCGGAATTACCACTTTATTGGCAACGCAATTACTTAAGTAGCTATTGCTATGAGGGTGCACTCGGTCGAGGTTGGAGTTTCTTTTGGGAAAGCCAGCTAATTAAAAGCGAAGATGGCTTTGTTTGGCAAAATCTATCCGGTGATATCCTTCCATTTCCTGACATTCCACTCGGACACCGTAACTTTAACGAAGCTGCTCAAGGCTGGATCATCCACCATGAGGATGACAGTTGGACGTTTCAAGATGCTGGTGAGCTACGCTATCATTATCCCCCTTTTGATGACAAAGGTTATAGTCGTTTAAGTCATATCGTTGATAATGTGGGAAACGAGCAGCGGTTTCATTACAACGAGCACCACCAACTGATCCATATTACGGGATGTGGTGATCTCAATATCGAGTGTGAATATCAATCTTTTCAACTTGCTGAAAAGACCGTATCGCGTCTTACTGCAGTCTATCAAGTAAACCCCCATCAGATACGCCGTCGTCTATGCGCTTATTTTTACAACGAAAGTGCCCAATTAATACGTGTTGAGCAACAGACAGATCACCCTTATCGCCAATTTGGGTGGACTGATGCCGGTGTTATGGCGTGGCATAGCGATAAATATGGCTTACGCAGTGAATACCGCTGGGCACTTTCAGAAGATAATCTTTGGCAAGTGATTGAAAACAAAACCAGCGAAGGCGAAAGCTATCGTCTTGAATATGATGATATCAACCTCACACGAACCGCTTATTGGCACGATGGTTCAACCTCATTTTGGCAACTTAATCATGATCACCAAATTATTCATTATACCGACCGTACAGGCATTAAAACGGCGCTAATTTGGGATGAGTTTGGATTACCTTGCGGTTGTCGCAATGCGTTGGGTCATACACATATTAGTGAATGGGACGCATTGGGCCGACTACTCAGCATAACGGATGGTAATGGTAACCAAACGCGTTGGCAATATCAGAATGAACGCGAGCGCCTTATCACTGTATTTTGGCCGGATAACACAGAGTCGCGTTTAGCGTATGACAGTTTGGGGCGACTGATTAAGGAAATTTCTCCCCTTCATCAGATCACCGAATACCGCTATGACTTTAAAACCACATTGCGCCCCACTATACGCATTGATGCCAAGCAAGGACGCAGTGAGTTTCTCTGGAACAAACGTGGGCAATTACTGCGCCATACTGATTGCTCAGGCAAACAACATATTTGGTGTTATGATGACGAAGGCCGTGTTGTTTCTCAAACCAACGCCTTGCAGGAAGCCACCGAGTACCAGTACGATGAGGTGGGACACCTCACTCGCATCATATTGCCCGATAATTCTACCGTGCAACTGGCATGGAATGCCGCAGGATTACTTACTCATCATCAACGCAATGACAATACCCCATGTCAATGGCAATACAACGCCTTCGGTCGCGTCACCACAGAAATTGATAAACTCGCTCGGCATATCCACTACCATTACAATGCACAAGGTGCATTAATTTCAATTGAAAATGCCAATGGCGGGCGTTATCTCCTCAACCGTGATGCCGAAGGTCGGTTAGTCGAAGAAATACGTCCTGATGAGACGCTACTCCAATACACCTATAACGTCGCTGGGCGACTGGTTGAAGAAGCTCACTTAGGCGACCGAGTCTTCACATCCGCACCACGCACAATATTACTCGACTATGATGCGGCGGGGAACCTTGCCAAACGAGAGACTTTAACTGATCGCTATCAATATCAATGGGATAGTATGAACCGCCTATTGGTCGCCAGCAAACAACCTAATCAACGTGGTCTTGAAATGGGTTTGCAAGCGAATCAAGTCCACTTTACCTACGATGCACTTGGCCGCATTATTCGTGAACAAACAGGCGACGATATCGTCGAATTTAATTATGATGAACTCAATAACCTAAGCCGTCTGACGTTACCTCAAGGTGACAGCCTCAACTGGCTCTATTATGGCTCTGGGCATGCCACGGCTATCAACCACCTTGTTGATAGTCGCTCTCAGTTACTTACTGAATTTGAACGTGACGACCTACACCGTGAAATCAGTCGAACTCAAGGAGAACTCACCCAATATCGGCAATACGATAAACTGGGGCGAACCATTAGCACTTTCAGCTCGCGTGATAAGCAACATCCATTAAATGGTATTACTTTATGGCGTAAGTGGTTTTATGATCCCCAAGATAATCTTGGTGCCATGGAAGACACCTATCGAGGTTGGGTAGAATACCTGTATGACTCAGAGCAACGTTTAAAAAAAGTCGCCAGTAGTGAAAACCTTGATGCTATGCTGTTTTACGATCGCGCGGATAATCTACTCGAACGCCCACAATCCGAAATGGATGCTGAACACTCCCCTACTTTAGCGCTGAGTCCTCAAGGAGATAAACTACGTCAATTTCAAGGGTGGCACTATCAGTATGATGCCTATGGTAATGTTATTGCTCGCCGTTACCGTAACCAATCACCACAAACCTATGCTTATGATGGTGATAATCGTCTGGTTATCGCTCATAATCAAGGCATAAAAGCCCAATACCACTACGATGCTCTGGGCCGTCGTATTCACAAAACCGTTGAAAACCGAGAAAGTGGCCAAGTTAAACGACAAGAGACGCATTTTATTTGGCAAGGGCTACGGTTACTGCAAGAGCAGGATCTCAATACCGGTAAACACCAAACTTATTGCTACGAAGAGCACGGCAGTTATACCCCTCTTGCCGTTATCGTGAAACAATCCAGTGGTTTTCATTATTACTGGCACCACTGCGATATTAACAGCGCCCCACTTGAAGTCACCAATGCACAAGGCAATACGCTATGGTCAGGGAAATATGAACGCTTTGGTTTTGTTCGCAATAGCCCATTAAGTTTCTACTCTGACCCTGAACGCGTGATGGCCTCCTTTGAGCAAAACTTACGCTATGCCGGACAATATTTTGACAATGACAAATTTGTCGGGAACAAATTTGAACAGCGCTTGCGCTGGCCCGTAGGGCGAGTATCAGGATGATACGAGTATTCAGGATTACATTTTAATACCTTCCGATTCTACGACCCACA