COG1896


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1896, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 18 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases
Function(s) descr. Nucleotide transport and metabolism (F)
General function prediction only (R)

Occurence in the database

COG1896 is associated with 18 different proteins (see tab "Protein list" and "Profile")
The 18 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_822 FBDBKF_04125 9545 10150 1 yfbR 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases Morganella morganii S1
1 group_3656 FBDBKF_12440 9911 10438 1 HD family hydrolase Morganella morganii S1
2 group_1901 FBDBKF_14180 33294 33875 1 yfbR 5'-deoxynucleotidase Morganella morganii S1
3 group_822 EHELCC_05415 69002 69607 1 yfbR 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases Morganella morganii S2
4 group_1901 EHELCC_08100 83110 83691 -1 yfbR 5'-deoxynucleotidase Morganella morganii S2
5 group_3656 EHELCC_19200 10992 11519 1 HD family hydrolase Morganella morganii S2
6 group_822 NLDBIP_05735 110067 110672 1 yfbR 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases Morganella morganii S4
7 group_1901 NLDBIP_08425 83110 83691 -1 yfbR 5'-deoxynucleotidase Morganella morganii S4
8 group_3656 NLDBIP_19170 16931 17458 1 HD family hydrolase Morganella morganii S4
9 group_822 LHKJJB_02615 87591 88196 1 yfbR 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases Morganella morganii S3
10 group_1901 LHKJJB_05840 173468 174049 1 yfbR 5'-deoxynucleotidase Morganella morganii S3
11 group_3656 LHKJJB_19060 16931 17458 1 HD family hydrolase Morganella morganii S3
12 group_1901 HKOGLL_05075 67701 68282 -1 yfbR 5'-deoxynucleotidase Morganella morganii S5
13 group_822 HKOGLL_06090 9455 10060 1 yfbR 5'-deoxynucleotidase YfbR and related HD superfamily hydrolases Morganella morganii S5
14 group_1901 F4V73_RS02755 580320 580901 -1 yfbR 5'-deoxynucleotidase Morganella psychrotolerans
15 group_822 F4V73_RS08565 1767888 1768502 1 HD domain-containing protein Morganella psychrotolerans
16 group_1901 PMI_RS08660 1892544 1893125 1 yfbR 5'-deoxynucleotidase Proteus mirabilis HI4320
17 group_822 PMI_RS09950 2156360 2156962 1 HD domain-containing protein Proteus mirabilis HI4320