Orthogroup:group_1939


Homologs in group_1939

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14555 FBDBKF_14555 Morganella morganii S1 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
EHELCC_15360 EHELCC_15360 Morganella morganii S2 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
NLDBIP_15890 NLDBIP_15890 Morganella morganii S4 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
LHKJJB_15950 LHKJJB_15950 Morganella morganii S3 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
HKOGLL_15070 HKOGLL_15070 Morganella morganii S5 yjhB ADP-ribose pyrophosphatase YjhB, NUDIX family
F4V73_RS07350 F4V73_RS07350 Morganella psychrotolerans - NUDIX domain-containing protein
PMI_RS04370 PMI_RS04370 Proteus mirabilis HI4320 - NUDIX hydrolase

Distribution of group_1939 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1939 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1939

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1939.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yjhB 5
2 - 2

Product

# Product Occurence
1 ADP-ribose pyrophosphatase YjhB, NUDIX family 5
2 NUDIX domain-containing protein 1
3 NUDIX hydrolase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1051 7 F Nucleotide transport and metabolism (F) ADP-ribose pyrophosphatase YjhB, NUDIX family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12152 7 phosphatase NudJ [EC:3.6.1.-] Riboflavin metabolism -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00293 7 NUDIX domain

Annotations of the 70 SwissProt hits

Annotation Number of occurrences
8-oxo-dGDP phosphatase NUDT18 4
8-oxo-dGTP diphosphatase 2
ADP-ribose pyrophosphatase 1
Geranyl diphosphate phosphohydrolase 1
MutT-like protein 1
Nucleoside diphosphate-linked moiety X motif 17 6
Nucleoside diphosphate-linked moiety X motif 6 3
Nudix hydrolase 1 1
Nudix hydrolase 19, chloroplastic 1
Nudix hydrolase 2 1
Nudix hydrolase 23, chloroplastic 1
Nudix hydrolase 25 1
Nudix hydrolase 26, chloroplastic 1
Nudix hydrolase 27, chloroplastic 1
Nudix hydrolase 5 1
Nudix hydrolase 6 1
Nudix hydrolase DR_1025 1
Oxidized purine nucleoside triphosphate hydrolase 1
Phosphatase NudJ 16
Putative mutator protein MutT4 2
RNA pyrophosphohydrolase 22
Uncharacterized Nudix hydrolase YvcI 1

Protein length

Min length 150
Max length 155
Mean length (sd) 154.0 (1.9)
Median length 155.0

Protein length distribution