Orthogroup:group_890


Homologs in group_890

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04620 FBDBKF_04620 Morganella morganii S1 cybB Cytochrome b561
EHELCC_05910 EHELCC_05910 Morganella morganii S2 cybB Cytochrome b561
NLDBIP_06230 NLDBIP_06230 Morganella morganii S4 cybB Cytochrome b561
LHKJJB_03110 LHKJJB_03110 Morganella morganii S3 cybB Cytochrome b561
HKOGLL_06585 HKOGLL_06585 Morganella morganii S5 cybB Cytochrome b561
F4V73_RS09070 F4V73_RS09070 Morganella psychrotolerans - cytochrome b
PMI_RS10445 PMI_RS10445 Proteus mirabilis HI4320 - cytochrome b

Distribution of group_890 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_890 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_890

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_890.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cybB 5
2 - 2

Product

# Product Occurence
1 Cytochrome b561 5
2 cytochrome b 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3038 7 C Energy production and conversion (C) Cytochrome b561

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12262 7 superoxide oxidase [EC:1.10.3.17] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01292 7 Prokaryotic cytochrome b561

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Cytochrome b561 homolog 1 1
Cytochrome b561 homolog 2 1
Probable superoxide oxidase CybB 1

Protein length

Min length 183
Max length 184
Mean length (sd) 183.1 (0.4)
Median length 183.0

Protein length distribution