COG1393
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1393, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 19 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Arsenate reductase or related protein, glutaredoxin family |
---|---|
Function(s) descr. | Inorganic ion transport and metabolism (P) |
Occurence in the database
COG1393 is associated with 19 different proteins (see tab "Protein list" and "Profile") |
The 19 proteins are classified into 3 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_3245 | FBDBKF_04900 | 188032 | 188454 | -1 | arsC | glutaredoxin-dependent arsenate reductase | Morganella morganii S1 |
1 | group_1825 | FBDBKF_13520 | 82108 | 82485 | 1 | arsC | ArsC family reductase | Morganella morganii S1 |
2 | group_1840 | FBDBKF_13630 | 104459 | 104812 | 1 | arsC | arsenate reductase (glutaredoxin) | Morganella morganii S1 |
3 | group_3245 | EHELCC_06190 | 247489 | 247911 | -1 | arsC | glutaredoxin-dependent arsenate reductase | Morganella morganii S2 |
4 | group_1840 | EHELCC_08465 | 170379 | 170732 | -1 | arsC | arsenate reductase (glutaredoxin) | Morganella morganii S2 |
5 | group_1825 | EHELCC_08575 | 192706 | 193083 | -1 | arsC | ArsC family reductase | Morganella morganii S2 |
6 | group_3245 | NLDBIP_06510 | 288554 | 288976 | -1 | arsC | glutaredoxin-dependent arsenate reductase | Morganella morganii S4 |
7 | group_1840 | NLDBIP_08790 | 170379 | 170732 | -1 | arsC | arsenate reductase (glutaredoxin) | Morganella morganii S4 |
8 | group_1825 | NLDBIP_08900 | 192706 | 193083 | -1 | arsC | ArsC family reductase | Morganella morganii S4 |
9 | group_3245 | LHKJJB_03390 | 266078 | 266500 | -1 | arsC | glutaredoxin-dependent arsenate reductase | Morganella morganii S3 |
10 | group_1825 | LHKJJB_05365 | 64076 | 64453 | 1 | arsC | ArsC family reductase | Morganella morganii S3 |
11 | group_1840 | LHKJJB_05475 | 86427 | 86780 | 1 | arsC | arsenate reductase (glutaredoxin) | Morganella morganii S3 |
12 | group_1840 | HKOGLL_05440 | 154970 | 155323 | -1 | arsC | arsenate reductase (glutaredoxin) | Morganella morganii S5 |
13 | group_1825 | HKOGLL_05550 | 177297 | 177674 | -1 | arsC | ArsC family reductase | Morganella morganii S5 |
14 | group_3245 | HKOGLL_06865 | 187942 | 188364 | -1 | arsC | glutaredoxin-dependent arsenate reductase | Morganella morganii S5 |
15 | group_1840 | F4V73_RS03120 | 667037 | 667393 | -1 | arsC | arsenate reductase (glutaredoxin) | Morganella psychrotolerans |
16 | group_1825 | F4V73_RS03240 | 691504 | 691872 | -1 | ArsC family reductase | Morganella psychrotolerans | |
17 | group_1825 | PMI_RS07570 | 1653627 | 1653998 | 1 | ArsC family reductase | Proteus mirabilis HI4320 | |
18 | group_1840 | PMI_RS07645 | 1667116 | 1667472 | 1 | arsC | arsenate reductase (glutaredoxin) | Proteus mirabilis HI4320 |