Orthogroup:group_1863


Homologs in group_1863

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13920 FBDBKF_13920 Morganella morganii S1 tkt transketolase
EHELCC_11590 EHELCC_11590 Morganella morganii S2 tkt transketolase
NLDBIP_11935 NLDBIP_11935 Morganella morganii S4 tkt transketolase
LHKJJB_11795 LHKJJB_11795 Morganella morganii S3 tkt transketolase
HKOGLL_10405 HKOGLL_10405 Morganella morganii S5 tkt transketolase
F4V73_RS12780 F4V73_RS12780 Morganella psychrotolerans tkt transketolase
PMI_RS01165 PMI_RS01165 Proteus mirabilis HI4320 tkt transketolase

Distribution of group_1863 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1863 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1863

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1863.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tkt 7

Product

# Product Occurence
1 transketolase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0021 7 G Carbohydrate transport and metabolism (G) Transketolase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00456 7 Transketolase, thiamine diphosphate binding domain
PF02779 7 Transketolase, pyrimidine binding domain
PF22613 7 Transketolase-like TK C-terminal domain

Annotations of the 401 SwissProt hits

Annotation Number of occurrences
1-deoxy-D-xylulose-5-phosphate synthase 292
1-deoxy-D-xylulose-5-phosphate synthase 1 5
1-deoxy-D-xylulose-5-phosphate synthase 2 5
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1
6-deoxy-6-sulfo-D-fructose transketolase subunit SqwG 1
Apulose-4-phosphate transketolase subunit A 2
Dihydroxyacetone synthase 2
Ferredoxin fas2 1
Probable transketolase 2
Putative transketolase C-terminal section 1
Putative transketolase N-terminal section 1
Putative uncharacterized transketolase family protein y4mN 1
Putative uncharacterized transketolase family protein y4mO 1
Pyruvate dehydrogenase E1 component 8
Transketolase 42
Transketolase 1 10
Transketolase 10 1
Transketolase 2 9
Transketolase 7 1
Transketolase, chloroplastic 3
Transketolase, chloroplastic (Fragment) 1
Transketolase, chromosomal 1
Transketolase, plasmid 1
Transketolase-1, chloroplastic 1
Transketolase-2, chloroplastic 1
Transketolase-like protein 1 4
Transketolase-like protein 2 3

Protein length

Unique protein length 664

Protein length distribution