COG0651


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0651, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Function(s) descr. Energy production and conversion (C)
Inorganic ion transport and metabolism (P)

Occurence in the database

COG0651 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_793 FBDBKF_03720 146179 147759 -1 hydrogenase 4 subunit F Morganella morganii S1
1 group_797 FBDBKF_03740 150845 152860 -1 hyfB hydrogenase 4 subunit B Morganella morganii S1
2 group_797 EHELCC_06795 94243 96258 1 hyfB hydrogenase 4 subunit B Morganella morganii S2
3 group_793 EHELCC_06815 99344 100924 1 hydrogenase 4 subunit F Morganella morganii S2
4 group_797 NLDBIP_07120 94116 96131 1 hyfB hydrogenase 4 subunit B Morganella morganii S4
5 group_793 NLDBIP_07140 99217 100797 1 hydrogenase 4 subunit F Morganella morganii S4
6 group_797 LHKJJB_06655 57862 59877 1 hyfB hydrogenase 4 subunit B Morganella morganii S3
7 group_793 LHKJJB_06675 62963 64543 1 hydrogenase 4 subunit F Morganella morganii S3
8 group_793 HKOGLL_04255 168844 170424 -1 hydrogenase 4 subunit F Morganella morganii S5
9 group_797 HKOGLL_04275 173510 175525 -1 hyfB hydrogenase 4 subunit B Morganella morganii S5
10 group_797 F4V73_RS11130 364578 366593 1 hyfB hydrogenase 4 subunit B Morganella psychrotolerans
11 group_793 F4V73_RS11150 369678 371258 1 hydrogenase 4 subunit F Morganella psychrotolerans
12 group_793 PMI_RS12475 2765532 2767100 -1 hydrogenase 4 subunit F Proteus mirabilis HI4320
13 group_797 PMI_RS12495 2770185 2772200 -1 hyfB hydrogenase 4 subunit B Proteus mirabilis HI4320