COG0626


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0626, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 46 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cystathionine beta-lyase/cystathionine gamma-synthase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0626 is associated with 46 different proteins (see tab "Protein list" and "Profile")
The 46 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_57 FBDBKF_00420 63274 64467 -1 metC cystathionine beta-lyase Morganella morganii S1
1 group_57 FBDBKF_02700 235630 236805 1 metC cystathionine beta-lyase Morganella morganii S1
2 group_92 FBDBKF_09245 80161 81318 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S1
3 group_2839 FBDBKF_10535 65602 66747 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S1
4 group_92 FBDBKF_10625 87403 88599 -1 megL methionine gamma-lyase Morganella morganii S1
5 group_1753 FBDBKF_12215 102991 104151 -1 metB cystathionine gamma-synthase Morganella morganii S1
6 group_3003 FBDBKF_17600 15657 16829 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S1
7 group_57 EHELCC_01125 244401 245594 1 metC cystathionine beta-lyase Morganella morganii S2
8 group_57 EHELCC_03170 623450 624625 1 metC cystathionine beta-lyase Morganella morganii S2
9 group_92 EHELCC_10165 64786 65943 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S2
10 group_1753 EHELCC_14090 30554 31714 1 metB cystathionine gamma-synthase Morganella morganii S2
11 group_2839 EHELCC_14870 65592 66737 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S2
12 group_92 EHELCC_14960 87393 88589 -1 megL methionine gamma-lyase Morganella morganii S2
13 group_3003 EHELCC_18085 15033 16205 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S2
14 group_57 NLDBIP_00290 55511 56686 -1 metC cystathionine beta-lyase Morganella morganii S4
15 group_57 NLDBIP_02335 434542 435735 -1 metC cystathionine beta-lyase Morganella morganii S4
16 group_92 NLDBIP_10510 43057 44214 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S4
17 group_2839 NLDBIP_14700 65592 66737 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S4
18 group_92 NLDBIP_14790 87393 88589 -1 megL methionine gamma-lyase Morganella morganii S4
19 group_1753 NLDBIP_15185 34491 35651 1 metB cystathionine gamma-synthase Morganella morganii S4
20 group_3003 NLDBIP_18065 22532 23704 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S4
21 group_57 LHKJJB_01745 335999 337174 1 metC cystathionine beta-lyase Morganella morganii S3
22 group_57 LHKJJB_03850 41783 42976 -1 metC cystathionine beta-lyase Morganella morganii S3
23 group_92 LHKJJB_10845 147314 148471 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S3
24 group_92 LHKJJB_14555 53137 54333 1 megL methionine gamma-lyase Morganella morganii S3
25 group_2839 LHKJJB_14645 74989 76134 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S3
26 group_1753 LHKJJB_15425 102991 104151 -1 metB cystathionine gamma-synthase Morganella morganii S3
27 group_3003 LHKJJB_18260 22532 23704 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S3
28 group_57 HKOGLL_01785 341510 342685 1 metC cystathionine beta-lyase Morganella morganii S5
29 group_57 HKOGLL_03195 244606 245799 1 metC cystathionine beta-lyase Morganella morganii S5
30 group_92 HKOGLL_13175 53137 54333 1 megL methionine gamma-lyase Morganella morganii S5
31 group_2839 HKOGLL_13265 74989 76134 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S5
32 group_92 HKOGLL_13905 80615 81772 -1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S5
33 group_1753 HKOGLL_14545 89654 90814 -1 metB cystathionine gamma-synthase Morganella morganii S5
34 group_3003 HKOGLL_17940 15033 16205 1 metC Cystathionine beta-lyase/cystathionine gamma-synthase Morganella morganii S5
35 group_57 F4V73_RS05195 1106265 1107440 1 metC cystathionine beta-lyase Morganella psychrotolerans
36 group_92 F4V73_RS10725 274766 275923 1 PLP-dependent aspartate aminotransferase family protein Morganella psychrotolerans
37 group_2839 F4V73_RS14245 67877 69022 -1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme Morganella psychrotolerans
38 group_92 F4V73_RS14335 89915 91111 -1 megL methionine gamma-lyase Morganella psychrotolerans
39 group_3003 F4V73_RS14980 234290 235462 1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme Morganella psychrotolerans
40 group_1753 F4V73_RS17045 36479 37639 -1 metB cystathionine gamma-synthase Morganella psychrotolerans
41 group_57 PMI_RS00135 48574 49767 -1 metC cystathionine beta-lyase Proteus mirabilis HI4320
42 group_57 PMI_RS03085 678743 679918 -1 metC cystathionine beta-lyase Proteus mirabilis HI4320
43 group_193 PMI_RS06025 1320420 1321703 1 cystathionine gamma-synthase family protein Proteus mirabilis HI4320
44 group_193 PMI_RS11105 2444537 2445718 -1 methionine gamma-lyase Proteus mirabilis HI4320
45 group_1753 PMI_RS15940 3537376 3538536 1 metB cystathionine gamma-synthase Proteus mirabilis HI4320