Homologs in group_57

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12 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00420 FBDBKF_00420 74.2 Morganella morganii S1 metC cystathionine beta-lyase
FBDBKF_02700 FBDBKF_02700 91.8 Morganella morganii S1 metC cystathionine beta-lyase
EHELCC_01125 EHELCC_01125 74.2 Morganella morganii S2 metC cystathionine beta-lyase
EHELCC_03170 EHELCC_03170 91.8 Morganella morganii S2 metC cystathionine beta-lyase
NLDBIP_00290 NLDBIP_00290 91.8 Morganella morganii S4 metC cystathionine beta-lyase
NLDBIP_02335 NLDBIP_02335 74.2 Morganella morganii S4 metC cystathionine beta-lyase
LHKJJB_01745 LHKJJB_01745 91.8 Morganella morganii S3 metC cystathionine beta-lyase
LHKJJB_03850 LHKJJB_03850 74.2 Morganella morganii S3 metC cystathionine beta-lyase
HKOGLL_01785 HKOGLL_01785 91.8 Morganella morganii S5 metC cystathionine beta-lyase
HKOGLL_03195 HKOGLL_03195 74.2 Morganella morganii S5 metC cystathionine beta-lyase
PMI_RS00135 PMI_RS00135 41.5 Proteus mirabilis HI4320 metC cystathionine beta-lyase
PMI_RS03085 PMI_RS03085 39.8 Proteus mirabilis HI4320 metC cystathionine beta-lyase

Distribution of the homologs in the orthogroup group_57

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_57

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43623 6.6e-153 437 61 1 340 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q52811 3.02e-124 367 47 2 380 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P06721 3.89e-112 336 44 4 389 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
P18949 1.24e-110 332 43 3 394 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44527 3.87e-106 321 41 3 394 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q73GL9 5.02e-100 305 40 3 393 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
Q07703 1.4e-83 263 38 8 399 1 metC Cystathionine beta-lyase Bordetella avium
Q1M0P5 5.79e-58 196 32 8 388 1 metB Cystathionine gamma-synthase Helicobacter pylori
Q9ZMW7 3.24e-56 192 32 8 389 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
P56069 5.57e-56 191 32 8 385 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
O31632 5.97e-56 191 31 8 389 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
A2RM21 1.65e-52 182 30 7 389 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 1.65e-52 182 30 7 389 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
Q9X0Z7 2.26e-52 182 30 7 367 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q55DV9 2.98e-52 181 28 5 388 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
Q60HG7 1.74e-51 180 30 6 380 2 CTH Cystathionine gamma-lyase Macaca fascicularis
P0C2T9 4.99e-51 178 30 7 389 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
Q83A83 1.02e-49 175 29 7 390 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q8L0X4 3.64e-49 174 30 10 378 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
P32929 3.98e-49 174 30 5 337 1 CTH Cystathionine gamma-lyase Homo sapiens
Q8VCN5 6.8e-49 173 29 8 383 1 Cth Cystathionine gamma-lyase Mus musculus
P55217 9.03e-49 176 29 5 376 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
P24601 8.22e-48 168 31 3 307 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
O05394 7.24e-47 167 28 7 372 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
P18757 1.23e-46 167 30 5 340 1 Cth Cystathionine gamma-lyase Rattus norvegicus
P55216 2.88e-46 166 33 5 294 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
Q19QT7 3.04e-46 166 28 7 381 2 CTH Cystathionine gamma-lyase Sus scrofa
Q58DW2 3.34e-46 166 29 5 337 2 CTH Cystathionine gamma-lyase Bos taurus
Q8RDT4 7.82e-46 165 28 8 379 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q9C876 8.32e-46 165 28 7 380 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
Q4L332 7.6e-45 162 30 10 370 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
P46807 7.9e-45 162 29 7 377 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
Q7MX71 4.88e-44 160 28 7 375 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
P13254 1.52e-43 159 27 5 384 1 mdeA L-methionine gamma-lyase Pseudomonas putida
P00935 1.84e-43 158 30 7 377 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
A0A0J6G7P5 2.81e-43 158 27 6 394 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
P9WGB7 1.46e-42 156 30 10 382 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 1.46e-42 156 30 10 382 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 1.46e-42 156 30 10 382 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q73KL7 1.43e-39 148 25 8 385 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
O31631 4.69e-39 146 28 12 392 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
P44502 7.82e-38 143 28 10 398 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q1K8G0 1.13e-36 141 26 9 375 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
P53780 1.23e-34 136 25 9 375 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
Q59829 1.19e-33 132 30 10 339 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P31373 2.15e-33 131 25 7 351 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P55218 5e-32 128 27 8 348 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A8CEI3 1.29e-31 127 24 11 407 1 None Mimosinase, chloroplastic Leucaena leucocephala
P0DXC4 4.95e-31 125 27 8 396 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
Q9WZY4 8.05e-31 125 27 12 419 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
O94350 1.11e-30 124 25 15 396 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P9WGB5 1.76e-30 124 25 5 345 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 1.76e-30 124 25 5 345 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0A0M3VI47 1.76e-30 124 23 8 367 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
U6BYK3 2.56e-27 115 23 11 405 1 None Mimosinase, chloroplastic Mimosa pudica
Q826W3 3.71e-26 112 28 13 397 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Q79VI4 4.76e-26 112 24 11 441 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P0DXD3 9.56e-26 110 25 9 400 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
P94890 1.72e-22 102 25 10 420 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
Q5SK88 7.8e-22 99 23 11 420 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q9SGU9 2.87e-21 98 24 13 356 1 MGL Methionine gamma-lyase Arabidopsis thaliana
Q92441 5.08e-21 97 26 10 388 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
P50125 6.43e-21 97 26 13 417 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
O13326 9.56e-21 96 23 9 422 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P38716 7.55e-20 93 27 11 344 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5MNH8 1.18e-18 90 24 15 428 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
Q5SJ58 6.03e-17 85 25 7 327 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
S0DUX5 1.04e-16 84 25 14 413 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
A0A0D2YG02 1.74e-16 84 25 14 413 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
W7MS09 2.05e-16 84 25 14 413 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
P53101 3.26e-16 83 26 11 286 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8J0B2 1.52e-15 81 23 15 428 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
O42851 5.46e-15 79 27 18 392 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P06106 9.7e-14 75 23 8 383 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G8XHD7 1.16e-07 57 29 4 160 1 besB L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
P38675 2.03e-05 50 23 15 351 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05195
Feature type CDS
Gene metC
Product cystathionine beta-lyase
Location 1106265 - 1107440 (strand: 1)
Length 1176 (nucleotides) / 391 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_57
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Protein Sequence

MTKKAVSEFHIDTQITQLGRDPATQSGFVNAPVYRGSTVVFPTMDALLNNRAEFNYGTAGTPTIKNLEQSWSALAGAEGTVLSPSGLGAIVLALLTTLKTGDHLLMPDSVYRPTRNFCHGLLNKMGIVTTYYDPMAGSDIESLIQSNTATIFLESPGSQSFEVQDVPAIVAVAKRHNIATIIDNTWATPLFFRAHDMGCDISLEAGTKYLGGHSDLLMGIVSANAAWWPALRETYDLMAMLPGAEDCFLALRGLRTLPIRLKEAQARALDMAHWLKARPEVIRVLHPAFPDCPGHEIWKRDFTGSSGLFSIVLDPKFTQDDIGKLLDGLSIFGMGYSWGGFESLIIPFDCAEYRTVTQWNPGGLTLRLQIGLEASDDLKTDLADGFARMAK

Flanking regions ( +/- flanking 50bp)

ATTTTTCGAATAATGCTGTATGAACAGCCCTGTTTATGTGTGAGGATTTTATGACGAAAAAAGCGGTTTCCGAGTTTCATATTGATACACAAATCACTCAGTTAGGCCGTGACCCGGCAACGCAGTCAGGTTTTGTTAATGCCCCGGTTTACCGGGGATCGACCGTGGTGTTTCCGACCATGGATGCCCTGCTCAATAACCGGGCTGAGTTTAACTACGGCACGGCGGGCACGCCGACCATCAAAAATTTAGAGCAATCCTGGAGCGCCCTTGCCGGTGCTGAAGGCACTGTATTATCACCCTCAGGGCTGGGTGCGATTGTACTGGCATTGCTGACAACACTGAAAACCGGCGATCACCTTCTGATGCCGGACAGCGTATACCGCCCGACCCGTAATTTCTGCCACGGGCTGCTGAACAAAATGGGGATTGTTACCACCTATTATGACCCGATGGCAGGCAGTGATATTGAATCGCTGATCCAGAGCAACACCGCCACCATTTTCCTTGAATCCCCTGGCTCCCAGAGCTTTGAAGTTCAGGATGTTCCGGCGATTGTGGCCGTGGCAAAACGCCATAATATCGCCACGATTATAGATAACACCTGGGCGACCCCATTGTTCTTCCGCGCCCATGATATGGGATGTGATATCTCTCTCGAAGCCGGGACAAAATACCTGGGCGGGCACTCAGATTTACTGATGGGGATTGTTTCAGCCAATGCCGCATGGTGGCCTGCACTGCGGGAAACTTATGATTTAATGGCCATGCTGCCGGGTGCCGAAGATTGCTTCCTTGCCCTGCGCGGGTTGCGCACCCTGCCAATCCGTCTGAAAGAAGCACAGGCGCGGGCGCTGGATATGGCGCACTGGCTGAAAGCACGCCCGGAAGTTATCCGGGTGCTGCATCCGGCATTTCCTGATTGCCCGGGGCATGAGATCTGGAAACGGGATTTCACCGGCTCTTCCGGGTTGTTCTCCATTGTGCTGGACCCGAAATTTACACAAGACGATATCGGGAAATTACTGGATGGTCTTTCTATTTTCGGAATGGGGTATTCATGGGGCGGATTTGAAAGCCTGATCATCCCGTTTGACTGCGCAGAATACCGCACAGTAACGCAGTGGAATCCCGGCGGACTGACATTGCGCCTGCAAATCGGACTGGAAGCCAGTGATGACCTGAAAACAGATTTAGCCGATGGATTCGCGCGTATGGCGAAGTGATATTGCCGTTGAAAAAGCAATAGTATGATAGTTAAAAAGACCGGCATTTT