Homologs in group_57

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00420 FBDBKF_00420 42.5 Morganella morganii S1 metC cystathionine beta-lyase
FBDBKF_02700 FBDBKF_02700 42.0 Morganella morganii S1 metC cystathionine beta-lyase
EHELCC_01125 EHELCC_01125 42.5 Morganella morganii S2 metC cystathionine beta-lyase
EHELCC_03170 EHELCC_03170 42.0 Morganella morganii S2 metC cystathionine beta-lyase
NLDBIP_00290 NLDBIP_00290 42.0 Morganella morganii S4 metC cystathionine beta-lyase
NLDBIP_02335 NLDBIP_02335 42.5 Morganella morganii S4 metC cystathionine beta-lyase
LHKJJB_01745 LHKJJB_01745 42.0 Morganella morganii S3 metC cystathionine beta-lyase
LHKJJB_03850 LHKJJB_03850 42.5 Morganella morganii S3 metC cystathionine beta-lyase
HKOGLL_01785 HKOGLL_01785 42.0 Morganella morganii S5 metC cystathionine beta-lyase
HKOGLL_03195 HKOGLL_03195 42.5 Morganella morganii S5 metC cystathionine beta-lyase
F4V73_RS05195 F4V73_RS05195 41.5 Morganella psychrotolerans metC cystathionine beta-lyase
PMI_RS03085 PMI_RS03085 40.5 Proteus mirabilis HI4320 metC cystathionine beta-lyase

Distribution of the homologs in the orthogroup group_57

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_57

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06721 0.0 521 61 1 395 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
P18949 0.0 515 61 1 395 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44527 2.23e-174 494 55 1 395 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q52811 7.27e-95 292 43 7 381 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q07703 8.17e-86 269 39 7 376 1 metC Cystathionine beta-lyase Bordetella avium
P43623 2.94e-85 266 39 3 335 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q73GL9 2.98e-75 242 33 7 401 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
Q8RDT4 9.94e-61 204 32 8 377 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q8L0X4 2.03e-60 203 31 8 377 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
Q1M0P5 1.99e-58 197 31 9 400 1 metB Cystathionine gamma-synthase Helicobacter pylori
Q60HG7 3.71e-58 197 34 6 345 2 CTH Cystathionine gamma-lyase Macaca fascicularis
Q9X0Z7 1.16e-57 196 32 7 371 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P56069 1.23e-57 196 31 9 399 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZMW7 2.15e-56 192 30 8 397 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q73KL7 4.54e-56 192 31 6 388 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
P18757 5.21e-56 192 33 6 345 1 Cth Cystathionine gamma-lyase Rattus norvegicus
Q19QT7 1.76e-55 191 33 6 345 2 CTH Cystathionine gamma-lyase Sus scrofa
Q7MX71 5.19e-55 189 31 8 374 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
O31632 5.2e-55 189 32 6 348 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
Q8VCN5 3.29e-54 187 33 6 345 1 Cth Cystathionine gamma-lyase Mus musculus
O05394 1.46e-53 185 32 5 342 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
P32929 1.64e-52 183 36 4 292 1 CTH Cystathionine gamma-lyase Homo sapiens
A2RM21 4.74e-52 181 30 9 395 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 4.74e-52 181 30 9 395 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
A0A0J6G7P5 9.81e-52 181 31 6 384 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
P9WGB7 2.85e-51 179 30 6 391 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 2.85e-51 179 30 6 391 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 2.85e-51 179 30 6 391 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q83A83 9.16e-51 178 32 9 393 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
P0C2T9 1.07e-49 175 30 9 395 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
P55216 2.27e-49 174 30 6 333 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
Q55DV9 3.2e-48 171 29 6 345 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
P55217 2.02e-47 173 30 8 379 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
Q58DW2 4.28e-47 169 32 6 330 2 CTH Cystathionine gamma-lyase Bos taurus
P13254 8.8e-46 165 29 7 379 1 mdeA L-methionine gamma-lyase Pseudomonas putida
P46807 1.7e-45 164 29 9 391 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
P31373 2.32e-44 161 31 10 360 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9C876 3.18e-44 161 29 6 372 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
P00935 8.4e-44 159 31 10 406 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
P53780 4.72e-41 154 29 10 353 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
O31631 3.13e-39 147 29 7 344 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
Q4L332 4.8e-37 141 30 11 345 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
P44502 9.71e-37 140 30 8 342 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0DXC4 2.35e-36 140 28 7 343 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
A0A0M3VI47 1.01e-35 139 27 8 369 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
P0DXD3 3.77e-35 136 25 9 385 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
U6BYK3 1.27e-34 136 25 7 365 1 None Mimosinase, chloroplastic Mimosa pudica
P24601 1.79e-34 133 28 6 311 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
Q9WZY4 4.22e-34 134 28 12 407 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P55218 7.07e-33 130 29 8 345 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A8CEI3 1.11e-32 130 24 8 393 1 None Mimosinase, chloroplastic Leucaena leucocephala
Q1K8G0 3.84e-32 129 26 7 347 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q79VI4 6.81e-30 122 25 11 432 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
O94350 3.54e-29 120 27 10 351 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q826W3 3.32e-27 115 27 11 397 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Q5SJ58 1.09e-26 113 28 14 408 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P9WGB5 2.45e-26 112 27 10 350 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 2.45e-26 112 27 10 350 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q59829 3.85e-26 111 25 8 353 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
O13326 9.27e-25 108 25 9 381 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P06106 2.58e-24 107 26 12 413 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q92441 2.67e-23 104 26 12 422 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q5MNH8 5.06e-23 103 24 13 429 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
P50125 1.12e-22 102 26 11 409 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q8J0B2 2.02e-22 102 23 12 432 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
P38716 2.16e-21 98 26 12 349 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5SK88 2.46e-21 98 26 13 384 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P94890 2.51e-21 98 24 13 444 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
A0A0D2YG02 4.02e-20 95 24 9 406 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
S0DUX5 5.59e-20 94 23 10 406 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
W7MS09 2.03e-19 92 23 10 406 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
Q9SGU9 1.52e-18 90 23 11 355 1 MGL Methionine gamma-lyase Arabidopsis thaliana
P53101 1.17e-17 87 26 12 324 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O42851 5.79e-17 85 29 7 232 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P38675 4.49e-06 52 24 7 248 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
A0A2V5GUR2 0.00016 47 22 10 270 1 ungC Alanine racemase ungC Aspergillus violaceofuscus (strain CBS 115571)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00135
Feature type CDS
Gene metC
Product cystathionine beta-lyase
Location 48574 - 49767 (strand: -1)
Length 1194 (nucleotides) / 397 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_57
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Protein Sequence

MTQKKPETSLLLSGRSKKYSQGAVNPIIQRTSSVIFDTVAQKREATQKRAEGALFYGRRGTTTHFALQEALTELEQGTGCALFPSGAAAITQSILAFIEQGCHILVTGSAYDPTQNFCDQILSKFSVTTTYFDPLIGTEISQLLRPETKIVFLESPGSITMEVQDLQGIITAVRHYNPNIIIMIDNTWAAGLLLKPLTLGADISIQSATKYIIGHSDGMLGFAVANQRCWPQLRENTYLLGQCADPDTAYMAARGLRTLAVRMKQHEQSGLEIARWLKQHPLVDNVYHPALSSCPGHTYFQRDFTGSNGLFSFSLKKILTTEEFSRFLDNLSLFKMAFSWGGFESLILGYHPNDIKAMRQYDTQPTLAGTLFRVHIGLENIDDLIEDLEQAFLRISN

Flanking regions ( +/- flanking 50bp)

TGCATTAACTTGGGGTAAACACATCATTACATAACAAGTAGGTATAACGGATGACGCAAAAAAAACCAGAAACCTCACTGCTATTAAGTGGTCGATCAAAAAAATATTCACAAGGCGCAGTAAACCCTATTATACAGCGAACTTCATCGGTTATTTTTGATACGGTTGCCCAAAAACGTGAAGCCACCCAAAAACGAGCTGAAGGAGCTCTATTTTATGGGCGAAGAGGTACTACCACGCATTTTGCACTACAAGAGGCACTAACCGAACTAGAACAAGGGACCGGTTGCGCATTATTTCCATCAGGTGCGGCGGCTATTACTCAATCTATTCTTGCGTTTATTGAACAAGGTTGTCATATCCTTGTGACTGGTTCCGCTTACGATCCCACGCAAAATTTTTGTGATCAGATATTAAGTAAATTTTCTGTCACCACAACCTATTTTGATCCCTTAATCGGCACTGAAATTAGTCAATTATTACGCCCTGAAACAAAAATTGTTTTTCTAGAATCACCCGGCTCTATTACGATGGAAGTGCAAGATTTACAAGGTATTATCACTGCGGTAAGACACTATAACCCAAATATTATTATAATGATTGATAATACGTGGGCAGCAGGTTTATTACTTAAACCTCTTACTTTAGGTGCTGATATTTCTATCCAATCAGCGACCAAATATATTATTGGTCACTCAGATGGTATGTTAGGTTTTGCTGTTGCTAATCAACGTTGTTGGCCACAATTACGTGAAAACACGTATTTATTAGGCCAGTGCGCAGATCCGGATACAGCTTATATGGCAGCTCGTGGTTTAAGAACCTTAGCAGTTAGAATGAAACAACATGAGCAAAGTGGATTAGAAATTGCGCGTTGGTTAAAACAGCACCCGCTAGTGGATAATGTCTACCATCCAGCACTCTCTTCTTGTCCGGGGCACACCTATTTTCAACGTGATTTTACTGGAAGTAATGGGTTGTTCTCTTTTAGTCTAAAAAAGATCCTCACCACTGAGGAATTTTCACGTTTTCTTGATAACTTATCCCTGTTTAAAATGGCCTTTTCATGGGGTGGATTTGAATCTCTTATTTTAGGCTATCATCCCAATGATATTAAAGCGATGCGACAATATGACACTCAGCCCACTCTCGCAGGAACCTTATTTAGAGTACATATCGGCTTAGAAAATATTGATGATTTAATTGAAGATCTAGAGCAAGCATTTTTACGTATTTCTAACTAATTCATCTCTTTTTTTATTAAAAAAAAGCTATCCCTGTGGTTTCACAGGGA