Homologs in group_1753

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12215 FBDBKF_12215 70.7 Morganella morganii S1 metB cystathionine gamma-synthase
EHELCC_14090 EHELCC_14090 70.7 Morganella morganii S2 metB cystathionine gamma-synthase
NLDBIP_15185 NLDBIP_15185 70.7 Morganella morganii S4 metB cystathionine gamma-synthase
LHKJJB_15425 LHKJJB_15425 70.7 Morganella morganii S3 metB cystathionine gamma-synthase
HKOGLL_14545 HKOGLL_14545 70.7 Morganella morganii S5 metB cystathionine gamma-synthase
F4V73_RS17045 F4V73_RS17045 72.3 Morganella psychrotolerans metB cystathionine gamma-synthase

Distribution of the homologs in the orthogroup group_1753

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1753

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00935 0.0 581 70 0 385 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
A2RM21 1.42e-112 337 44 2 375 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 1.42e-112 337 44 2 375 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
P0C2T9 2.03e-112 336 45 2 374 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
O05394 5.55e-106 320 42 2 377 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
Q83A83 6.43e-106 320 44 3 376 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
P56069 3.83e-105 317 42 2 377 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q1M0P5 4.71e-105 317 43 2 374 1 metB Cystathionine gamma-synthase Helicobacter pylori
Q9ZMW7 6.79e-103 311 42 2 377 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q8L0X4 2.31e-102 311 43 5 387 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
Q55DV9 1.64e-101 308 42 3 384 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
Q8RDT4 3.58e-101 308 42 5 387 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
P9WGB7 6.53e-96 294 41 3 381 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 6.53e-96 294 41 3 381 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 6.53e-96 294 41 3 381 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q60HG7 1.1e-95 294 42 4 381 2 CTH Cystathionine gamma-lyase Macaca fascicularis
Q19QT7 7.39e-95 292 41 4 381 2 CTH Cystathionine gamma-lyase Sus scrofa
Q8VCN5 1.43e-94 291 42 4 381 1 Cth Cystathionine gamma-lyase Mus musculus
O31631 2.74e-94 290 41 3 380 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
P55216 4.83e-93 287 44 5 366 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
O31632 1.4e-92 286 39 3 374 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
P46807 1.69e-91 283 40 2 377 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
P18757 1.83e-90 280 40 4 381 1 Cth Cystathionine gamma-lyase Rattus norvegicus
P13254 5.05e-90 280 39 2 387 1 mdeA L-methionine gamma-lyase Pseudomonas putida
P32929 3.2e-87 272 41 3 362 1 CTH Cystathionine gamma-lyase Homo sapiens
A0A0J6G7P5 7.3e-87 271 39 4 389 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
Q73KL7 1.33e-86 271 38 5 393 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
Q58DW2 1.42e-86 271 41 4 363 2 CTH Cystathionine gamma-lyase Bos taurus
P44502 3.09e-86 269 38 6 384 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q7MX71 1.8e-85 268 39 5 392 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
P53780 2.12e-85 270 39 2 366 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
P31373 1.74e-82 260 39 9 393 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q4L332 1.99e-81 257 37 5 384 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
A0A0M3VI47 9.56e-80 255 37 2 377 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
P24601 7.72e-76 240 39 1 315 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
P55218 1.7e-74 239 36 1 337 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
U6BYK3 4.52e-73 237 34 3 363 1 None Mimosinase, chloroplastic Mimosa pudica
Q1K8G0 2.75e-72 236 36 4 364 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
A8CEI3 2.86e-72 235 35 3 360 1 None Mimosinase, chloroplastic Leucaena leucocephala
O94350 3.85e-72 233 37 6 377 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P55217 4.71e-68 227 35 5 360 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
Q9WZY4 3.56e-65 216 31 8 423 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P9WGB5 5.34e-64 213 31 4 388 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 5.34e-64 213 31 4 388 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0DXD3 5.62e-62 207 33 6 385 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
O13326 4.78e-61 206 32 7 428 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P94890 6.46e-60 203 31 5 425 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
Q5SK88 1.53e-59 201 33 9 422 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
Q9C876 3.5e-59 200 33 4 356 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
P0DXC4 5.28e-59 199 32 5 392 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
Q5SJ58 5.35e-58 197 32 8 411 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P53101 2.34e-56 194 34 13 401 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
W7MS09 1.51e-55 191 31 6 422 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
A0A0D2YG02 2.42e-55 191 31 5 420 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
S0DUX5 3.36e-55 190 31 6 422 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
Q9X0Z7 8.48e-53 182 30 5 365 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q5MNH8 3.07e-50 178 30 6 414 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
P50125 4.97e-50 177 29 5 426 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q79VI4 9.31e-50 176 30 5 421 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q73GL9 8.44e-49 172 29 7 405 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
Q59829 5.85e-48 170 31 8 387 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q826W3 2.94e-47 169 34 11 396 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Q52811 1.01e-46 167 28 5 383 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q8J0B2 3.37e-46 167 30 6 420 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
Q07703 2.03e-45 164 29 2 342 1 metC Cystathionine beta-lyase Bordetella avium
Q92441 4.15e-45 164 30 7 409 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
P44527 2.46e-42 155 28 8 393 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P06721 5.4e-40 149 30 6 346 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
O42851 1.5e-39 148 32 12 398 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P18949 3.23e-39 147 30 7 343 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P06106 8.62e-39 147 28 7 435 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9SGU9 1.27e-38 146 31 10 386 1 MGL Methionine gamma-lyase Arabidopsis thaliana
P38716 1.11e-37 142 29 14 395 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P43623 9.05e-36 136 28 4 324 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P38675 2.12e-18 90 30 6 259 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
P47164 3.3e-18 90 29 9 277 1 STR2 Cystathionine gamma-synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q12198 1.13e-17 88 29 9 279 1 HSU1 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O74314 1.11e-14 79 28 11 323 3 SPBC15D4.09c Probable cystathionine gamma-synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q04533 1.38e-12 72 27 11 293 1 YML082W Putative cystathionine gamma-synthase YML082W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G8XHD7 8.14e-11 67 25 8 289 1 besB L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
A0A0C2WKN7 4.56e-10 64 24 8 272 2 iboG1 Cystathionine gamma-synthase-like enzyme iboG1 Amanita muscaria (strain Koide BX008)
A0A2V5GUR2 7.9e-10 63 25 9 266 1 ungC Alanine racemase ungC Aspergillus violaceofuscus (strain CBS 115571)
A0A2I1D2M7 1.56e-09 63 25 13 281 3 ungC' Alanine racemase ungC' Aspergillus campestris (strain IBT 28561)
A0A397HQN2 2.01e-05 50 22 8 260 1 ankD Cystathionine gamma-synthase-like protein ankD Aspergillus thermomutatus
A0A0C2S258 0.000543 45 23 8 272 2 iboG2 Cystathionine gamma-synthase-like enzyme iboG2 Amanita muscaria (strain Koide BX008)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15940
Feature type CDS
Gene metB
Product cystathionine gamma-synthase
Location 3537376 - 3538536 (strand: 1)
Length 1161 (nucleotides) / 386 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1753
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MTKKTATIAIHNGLNEDKQYGCVVPPIYLSSTYNFLAFNQPREHDYSRRGNPSRDMVQNALAELEGGVGAVVTSSGMSAIHLICTTFLKPGDVIVAPHDCYGGSYRLFNSQQQRGAYRVVFVDQNDEQALQQALALAPKIVFIETPSNPLLRITDIEKISQLAHQVGALVVADNTFMSPVLQKPLALGADLVVHSCTKYLNGHSDLVAGVVISQCRKQLEDLSWWANNIGVTAGAFDSYLLLRGIRTLVPRIRLQQENTQALVAYLQTQPLVDKIYYPALEHHVGHAIAKKQQQGFGAMLSFELKGGIEAIKSFLSHLTLFTLAESLGGVETLICHPATMTHAGMSEEARKTAGISNALLRISVGIEDSLDLINDLQNAFNAATKR

Flanking regions ( +/- flanking 50bp)

GGATATGCTGTAAGCGACTTTTCCACTTAGCGCTGTAACAAGGTGTCTGTATGACGAAGAAAACCGCAACCATTGCCATTCACAATGGGCTTAATGAAGATAAGCAATATGGCTGTGTTGTACCGCCAATCTATCTTTCTAGCACCTATAATTTCTTAGCATTTAATCAACCTCGTGAACATGATTACTCTCGTCGGGGCAATCCCTCGCGCGATATGGTGCAAAATGCATTAGCAGAGCTTGAAGGTGGGGTGGGAGCGGTTGTTACTAGCAGTGGGATGTCAGCAATTCATTTAATTTGTACGACTTTTTTAAAACCGGGTGATGTCATTGTGGCGCCCCATGATTGTTATGGGGGCAGTTATCGTCTGTTTAATAGTCAGCAGCAACGTGGTGCTTATCGTGTGGTATTTGTTGATCAAAACGATGAGCAAGCGTTACAACAGGCGTTGGCATTAGCACCAAAAATAGTATTTATTGAAACACCCAGTAATCCACTATTGCGCATCACTGATATTGAGAAAATAAGCCAATTAGCTCACCAAGTTGGGGCGTTGGTGGTGGCGGATAACACCTTTATGAGCCCGGTATTGCAAAAGCCATTGGCTTTAGGGGCTGATTTAGTGGTGCATTCTTGCACTAAGTATCTTAATGGGCATTCTGATCTTGTCGCGGGTGTTGTGATTAGTCAGTGTAGGAAACAGCTTGAGGATTTAAGCTGGTGGGCAAATAATATTGGTGTTACTGCTGGGGCGTTTGATAGTTATTTGTTATTACGAGGGATCAGAACCTTAGTACCACGAATTCGATTACAACAAGAAAATACTCAAGCATTGGTGGCTTATCTACAAACACAACCCTTAGTGGATAAAATTTATTACCCAGCACTAGAACATCATGTCGGTCACGCGATAGCGAAAAAACAGCAACAAGGTTTTGGTGCGATGTTAAGTTTTGAGTTAAAAGGGGGGATTGAAGCAATTAAATCCTTTTTATCTCATTTAACACTCTTTACACTGGCAGAGTCTTTAGGTGGTGTAGAAACATTAATTTGTCATCCGGCGACCATGACACACGCAGGAATGTCTGAAGAAGCGAGAAAAACCGCTGGGATCAGTAACGCTTTATTGCGCATTTCCGTGGGGATTGAGGATAGTCTGGATCTCATCAACGATTTACAAAATGCGTTTAATGCAGCAACGAAAAGGTAACCATGGATCATGAGCGTAGTGGCGATTAAACAACAGGCGCAACCAACTTG