Orthogroup:group_36


Homologs in group_36

Help

13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09245 FBDBKF_09245 Morganella morganii S1 metC Cystathionine beta-lyase/cystathionine gamma-synthase
FBDBKF_10625 FBDBKF_10625 Morganella morganii S1 megL methionine gamma-lyase
EHELCC_10165 EHELCC_10165 Morganella morganii S2 metC Cystathionine beta-lyase/cystathionine gamma-synthase
EHELCC_14960 EHELCC_14960 Morganella morganii S2 megL methionine gamma-lyase
NLDBIP_10510 NLDBIP_10510 Morganella morganii S4 metC Cystathionine beta-lyase/cystathionine gamma-synthase
NLDBIP_14790 NLDBIP_14790 Morganella morganii S4 megL methionine gamma-lyase
LHKJJB_10845 LHKJJB_10845 Morganella morganii S3 metC Cystathionine beta-lyase/cystathionine gamma-synthase
LHKJJB_14555 LHKJJB_14555 Morganella morganii S3 megL methionine gamma-lyase
HKOGLL_13175 HKOGLL_13175 Morganella morganii S5 megL methionine gamma-lyase
HKOGLL_13905 HKOGLL_13905 Morganella morganii S5 metC Cystathionine beta-lyase/cystathionine gamma-synthase
F4V73_RS10725 F4V73_RS10725 Morganella psychrotolerans - PLP-dependent aspartate aminotransferase family protein
F4V73_RS14335 F4V73_RS14335 Morganella psychrotolerans megL methionine gamma-lyase
PMI_RS11105 PMI_RS11105 Proteus mirabilis HI4320 - methionine gamma-lyase

Distribution of group_36 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_36 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_36

Orthogroup content: 13 members

Help

This page summarizes the annotation of all members of the orthologous group group_36.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 metC 5
2 megL 6
3 - 2

Product

# Product Occurence
1 Cystathionine beta-lyase/cystathionine gamma-synthase 5
2 methionine gamma-lyase 7
3 PLP-dependent aspartate aminotransferase family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0626 13 E Amino acid transport and metabolism (E) Cystathionine beta-lyase/cystathionine gamma-synthase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01761 7 methionine-gamma-lyase [EC:4.4.1.11] Cysteine and methionine metabolism
Selenocompound metabolism
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01053 13 Cys/Met metabolism PLP-dependent enzyme

Annotations of the 142 SwissProt hits

Annotation Number of occurrences
(5-formylfuran-3-yl)methyl phosphate transaminase 1
5-aminolevulinate synthase 5
5-aminolevulinate synthase, erythroid-specific, mitochondrial 8
5-aminolevulinate synthase, non-specific, mitochondrial 1
8-amino-7-oxononanoate synthase 6
8-amino-7-oxononanoate synthase 1 2
8-amino-7-oxononanoate synthase 2 1
Alanine racemase ungC 1
Alanine racemase ungC' 1
Aspartate aminotransferase 1
Aspartate/prephenate aminotransferase 1
Canavanine gamma-lyase 2
Cystathionine beta-lyase 10
Cystathionine beta-lyase MetC 3
Cystathionine beta-lyase, chloroplastic 2
Cystathionine gamma-lyase 9
Cystathionine gamma-synthase 11
Cystathionine gamma-synthase 1, chloroplastic 1
Cystathionine gamma-synthase-like enzyme iboG1 1
Cystathionine gamma-synthase-like enzyme iboG2 1
Cystathionine gamma-synthase-like protein ankD 1
Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase 1
Histidinol-phosphate aminotransferase 7
Homocysteine synthase 2
Homocysteine/cysteine synthase 3
Kynurenine--oxoglutarate transaminase 1 3
Kynurenine--oxoglutarate transaminase 3 1
L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase 1
L-alanine/L-glutamate racemase 2
L-methionine gamma-lyase 7
Methionine gamma-lyase 1
Mimosinase, chloroplastic 2
O-acetyl-L-homoserine sulfhydrylase 3
O-acetyl-L-homoserine sulfhydrylase 1 1
O-acetyl-L-homoserine sulfhydrylase 2 1
O-succinylhomoserine sulfhydrylase 3
Probable aspartate aminotransferase 1
Probable aspartate aminotransferase (Fragment) 1
Probable cystathionine gamma-synthase 1
Probable cystathionine gamma-synthase (Fragment) 1
Probable cystathionine gamma-synthase 2 1
Putative 8-amino-7-oxononanoate synthase 5
Putative 8-amino-7-oxononanoate synthase 2 1
Putative cystathionine beta-lyase 2
Putative cystathionine gamma-lyase 1
Putative cystathionine gamma-lyase 2 1
Putative cystathionine gamma-synthase YML082W 1
Putative phenylalanine aminotransferase 1
Putative pyridoxal phosphate-dependent acyltransferase 7
Serine palmitoyltransferase 3
Sulfhydrylase FUB7 3
Sulfhydrylase-like protein lolC1 1
Sulfhydrylase-like protein lolC2 1
Uncharacterized protein YnbB 1
Uncharacterized trans-sulfuration enzyme C23A1.14c 1
Uncharacterized trans-sulfuration enzyme YHR112C 1

Protein length

Min length 385
Max length 398
Mean length (sd) 391.6 (6.5)
Median length 393.0

Protein length distribution