Orthogroup:group_9


Homologs in group_9

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21 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05295 FBDBKF_05295 Morganella morganii S1 oppA oligopeptide ABC transporter substrate-binding protein OppA
FBDBKF_05300 FBDBKF_05300 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
FBDBKF_05570 FBDBKF_05570 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12020 EHELCC_12020 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12290 EHELCC_12290 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12295 EHELCC_12295 Morganella morganii S2 oppA oligopeptide ABC transporter substrate-binding protein OppA
NLDBIP_12360 NLDBIP_12360 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12630 NLDBIP_12630 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12635 NLDBIP_12635 Morganella morganii S4 oppA oligopeptide ABC transporter substrate-binding protein OppA
LHKJJB_12220 LHKJJB_12220 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12490 LHKJJB_12490 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12495 LHKJJB_12495 Morganella morganii S3 oppA oligopeptide ABC transporter substrate-binding protein OppA
HKOGLL_10835 HKOGLL_10835 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11105 HKOGLL_11105 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11110 HKOGLL_11110 Morganella morganii S5 oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS03735 F4V73_RS03735 Morganella psychrotolerans - peptide ABC transporter substrate-binding protein
F4V73_RS05750 F4V73_RS05750 Morganella psychrotolerans oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS05755 F4V73_RS05755 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS06600 PMI_RS06600 Proteus mirabilis HI4320 - peptide ABC transporter substrate-binding protein
PMI_RS07140 PMI_RS07140 Proteus mirabilis HI4320 oppA oligopeptide ABC transporter substrate-binding protein OppA
PMI_RS07145 PMI_RS07145 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of group_9 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_9 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_9

Orthogroup content: 21 members

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This page summarizes the annotation of all members of the orthologous group group_9.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 oppA 17
2 - 4

Product

# Product Occurence
1 oligopeptide ABC transporter substrate-binding protein OppA 7
2 ABC-type oligopeptide transport system, periplasmic component 10
3 peptide ABC transporter substrate-binding protein 2
4 ABC transporter substrate-binding protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4166 21 E Amino acid transport and metabolism (E) ABC-type oligopeptide transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15580 21 oligopeptide transport system substrate-binding protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00496 21 Bacterial extracellular solute-binding proteins, family 5 Middle

Annotations of the 81 SwissProt hits

Annotation Number of occurrences
Di/tripeptide-binding protein 1 1
Di/tripeptide-binding protein 2 1
Di/tripeptide-binding protein 3 1
Di/tripeptide-binding protein 4 1
Dipeptide-binding protein 3
Dipeptide-binding protein DppE 1
Glutathione-binding protein GsiB 16
Heme-binding protein A 1
Metal-staphylopine-binding protein CntA 2
Nickel-binding periplasmic protein 1
Nickel-binding protein NikA 1
Oligopeptide-binding protein AliA 1
Oligopeptide-binding protein AliB 2
Oligopeptide-binding protein AmiA 1
Oligopeptide-binding protein AppA 1
Oligopeptide-binding protein OppA 4
Oligopeptide-binding protein SarA 1
Peptide transport periplasmic protein SapA 2
Peptidoglycan-binding protein YepA 1
Periplasmic alpha-galactoside-binding protein 1
Periplasmic murein peptide-binding protein MppA 1
Periplasmic oligopeptide-binding protein OppA 3
Probable ABC transporter periplasmic-binding protein SapA 1
Probable ABC transporter-binding protein DR_1571 1
Probable D,D-dipeptide-binding periplasmic protein DdpA 1
Probable deoxycholate-binding periplasmic protein YgiS 1
Probable di/tripeptide-binding protein 5 1
Probable monoacyl phosphatidylinositol tetramannoside-binding protein LpqW 3
Probable peptide ABC transporter periplasmic-binding protein y4tO 1
Probable peptide-binding protein YejA 1
Protein XP55 1
Putative ABC transporter peptide-binding protein BAB2_0812 1
Putative ABC transporter peptide-binding protein BMEII0859 1
Putative ABC transporter peptide-binding protein BOV_A0352 1
Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 1
Putative ABC transporter peptide-binding protein BruAb2_0792 1
Putative binding protein BAB2_0664 1
Putative binding protein BMEII0691 1
Putative binding protein BRA0576/BS1330_II0571 1
Putative binding protein BruAb2_0648 1
Putative binding protein HI_0213 1
Putative peptide-binding periplasmic protein BAB2_1049 1
Putative peptide-binding periplasmic protein BMEII0210 1
Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 1
Putative peptide-binding periplasmic protein BruAb2_1030 1
Tripeptide-binding protein 1
Uncharacterized lipoprotein MT2662 1
Uncharacterized lipoprotein Mb2616c 1
Uncharacterized lipoprotein Rv2585c 1
Uncharacterized protein MT1317 1
Uncharacterized protein Mb1311c 1
Uncharacterized protein Rv1280c 1
Uncharacterized protein YhjP 1
Uncharacterized protein y4wM 1

Protein length

Min length 518
Max length 548
Mean length (sd) 543.4 (6.3)
Median length 544.0

Protein length distribution