Homologs in group_1753

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12215 FBDBKF_12215 89.1 Morganella morganii S1 metB cystathionine gamma-synthase
EHELCC_14090 EHELCC_14090 89.1 Morganella morganii S2 metB cystathionine gamma-synthase
NLDBIP_15185 NLDBIP_15185 89.1 Morganella morganii S4 metB cystathionine gamma-synthase
LHKJJB_15425 LHKJJB_15425 89.1 Morganella morganii S3 metB cystathionine gamma-synthase
HKOGLL_14545 HKOGLL_14545 89.1 Morganella morganii S5 metB cystathionine gamma-synthase
PMI_RS15940 PMI_RS15940 72.3 Proteus mirabilis HI4320 metB cystathionine gamma-synthase

Distribution of the homologs in the orthogroup group_1753

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1753

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00935 0.0 547 67 0 386 1 metB Cystathionine gamma-synthase Escherichia coli (strain K12)
A2RM21 1.17e-106 321 43 2 375 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris (strain MG1363)
P0A4K2 1.17e-106 321 43 2 375 3 metC Cystathionine beta-lyase Lactococcus lactis subsp. lactis (strain IL1403)
O05394 7.04e-105 317 44 2 380 1 mccB Cystathionine gamma-lyase Bacillus subtilis (strain 168)
P0C2T9 8.02e-105 317 43 2 375 1 metC Cystathionine beta-lyase Lactococcus lactis subsp. cremoris
Q1M0P5 7.71e-102 309 43 2 378 1 metB Cystathionine gamma-synthase Helicobacter pylori
P56069 1.45e-101 308 43 2 377 1 metB Cystathionine gamma-synthase Helicobacter pylori (strain ATCC 700392 / 26695)
Q83A83 6.37e-99 302 41 3 376 1 metC Cystathionine beta-lyase Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q9ZMW7 1.07e-98 301 41 2 378 3 metB Cystathionine gamma-synthase Helicobacter pylori (strain J99 / ATCC 700824)
Q55DV9 7.94e-96 294 41 3 381 1 cysA Cystathionine gamma-lyase Dictyostelium discoideum
P9WGB7 6.7e-95 291 43 4 380 1 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB6 6.7e-95 291 43 4 380 3 metB Cystathionine gamma-synthase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66876 6.7e-95 291 43 4 380 3 metB Cystathionine gamma-synthase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P55216 1.32e-91 283 43 4 365 3 cth-2 Putative cystathionine gamma-lyase 2 Caenorhabditis elegans
P46807 1.21e-90 281 41 2 377 3 metB Cystathionine gamma-synthase Mycobacterium leprae (strain TN)
O31632 3.8e-89 277 38 2 377 1 metC Cystathionine beta-lyase MetC Bacillus subtilis (strain 168)
Q8L0X4 1.94e-88 275 39 4 387 1 mgl L-methionine gamma-lyase Fusobacterium nucleatum subsp. polymorphum
P53780 1.21e-87 275 41 2 368 1 At3g57050 Cystathionine beta-lyase, chloroplastic Arabidopsis thaliana
Q19QT7 3.84e-87 272 40 6 383 2 CTH Cystathionine gamma-lyase Sus scrofa
Q8RDT4 1.29e-86 271 38 5 390 1 FN1419 L-methionine gamma-lyase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q60HG7 2.11e-86 270 40 5 382 2 CTH Cystathionine gamma-lyase Macaca fascicularis
Q8VCN5 2.68e-86 270 40 5 381 1 Cth Cystathionine gamma-lyase Mus musculus
A0A0J6G7P5 7.09e-85 266 40 4 388 3 megL L-methionine gamma-lyase Pseudomonas deceptionensis
P44502 7.39e-84 263 39 5 373 3 metB Cystathionine gamma-synthase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P18757 3.31e-83 262 39 5 382 1 Cth Cystathionine gamma-lyase Rattus norvegicus
Q58DW2 5.43e-83 261 41 5 365 2 CTH Cystathionine gamma-lyase Bos taurus
A0A0M3VI47 1.2e-82 262 39 2 376 1 CBL Cystathionine beta-lyase, chloroplastic Mimosa pudica
O31631 1.89e-82 259 38 3 366 1 metI Cystathionine gamma-synthase/O-acetylhomoserine (thiol)-lyase Bacillus subtilis (strain 168)
P13254 3.25e-82 259 38 4 387 1 mdeA L-methionine gamma-lyase Pseudomonas putida
P31373 5.36e-81 256 41 10 394 1 CYS3 Cystathionine gamma-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P32929 1.19e-79 253 40 5 365 1 CTH Cystathionine gamma-lyase Homo sapiens
Q7MX71 3.33e-78 249 38 5 388 1 mgl L-methionine gamma-lyase Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q4L332 8.55e-77 245 37 6 371 1 metC Cystathionine beta-lyase MetC Staphylococcus haemolyticus (strain JCSC1435)
Q73KL7 3.75e-76 244 37 5 391 1 megL L-methionine gamma-lyase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
P55218 2.26e-75 242 39 1 331 1 metZ O-succinylhomoserine sulfhydrylase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P24601 6.64e-74 235 40 1 315 3 metB Probable cystathionine gamma-synthase (Fragment) Herpetosiphon aurantiacus
Q1K8G0 2.57e-70 230 36 4 366 1 met-2 Cystathionine beta-lyase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
P55217 9.97e-70 232 35 4 370 1 CGS1 Cystathionine gamma-synthase 1, chloroplastic Arabidopsis thaliana
O94350 2.7e-69 226 37 6 377 3 str3 Cystathionine beta-lyase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
U6BYK3 9.12e-65 216 33 4 357 1 None Mimosinase, chloroplastic Mimosa pudica
A8CEI3 3.86e-63 211 33 3 366 1 None Mimosinase, chloroplastic Leucaena leucocephala
Q9C876 5.43e-63 210 35 3 341 3 CGS2 Probable cystathionine gamma-synthase 2 Arabidopsis thaliana
P0DXD3 5.75e-63 210 34 5 387 1 Rleg2_5066 Canavanine gamma-lyase Rhizobium leguminosarum bv. trifolii (strain WSM2304)
P0DXC4 1.66e-62 208 34 7 393 1 JFQ02_10020 Canavanine gamma-lyase Pseudomonas canavaninivorans
P9WGB5 1.45e-59 201 34 2 339 1 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGB4 1.45e-59 201 34 2 339 3 metZ O-succinylhomoserine sulfhydrylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9WZY4 1.94e-54 188 29 7 422 1 TM_0882 O-acetyl-L-homoserine sulfhydrylase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q5SK88 3.71e-52 182 32 9 417 1 oah1 O-acetyl-L-homoserine sulfhydrylase 1 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P94890 9.08e-52 181 30 6 429 1 metY O-acetyl-L-homoserine sulfhydrylase Leptospira meyeri
Q5SJ58 1.31e-50 177 32 9 412 1 oah2 O-acetyl-L-homoserine sulfhydrylase 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
O13326 1.99e-50 177 30 5 418 1 met17 Homocysteine synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q52811 4.93e-50 176 31 4 387 3 metC Putative cystathionine beta-lyase Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q9X0Z7 1.04e-49 174 30 7 367 1 aar L-alanine/L-glutamate racemase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P53101 1.68e-49 176 32 11 399 1 STR3 Cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q826W3 2.19e-48 172 35 10 393 1 mgl L-methionine gamma-lyase Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680)
Q59829 7.14e-48 170 31 6 383 3 cysA Putative cystathionine gamma-lyase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q5MNH8 6.48e-47 169 30 5 376 2 lolC2 Sulfhydrylase-like protein lolC2 Epichloe uncinata
A0A0D2YG02 1.6e-46 167 29 7 418 1 FUB7 Sulfhydrylase FUB7 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936)
W7MS09 4.63e-46 166 29 7 419 1 FUB7 Sulfhydrylase FUB7 Gibberella moniliformis (strain M3125 / FGSC 7600)
S0DUX5 5.35e-46 166 29 7 419 1 FUB7 Sulfhydrylase FUB7 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831)
P50125 2.67e-45 164 28 7 427 1 cysD Homocysteine synthase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q73GL9 1.25e-44 162 28 6 382 1 aar L-alanine/L-glutamate racemase Wolbachia pipientis wMel
Q9SGU9 6.24e-44 160 32 9 382 1 MGL Methionine gamma-lyase Arabidopsis thaliana
Q07703 1.51e-42 156 30 2 339 1 metC Cystathionine beta-lyase Bordetella avium
Q8J0B2 5.3e-42 156 30 5 376 2 lolC1 Sulfhydrylase-like protein lolC1 Epichloe uncinata
Q79VI4 6.79e-40 150 29 5 422 1 metY O-acetyl-L-homoserine sulfhydrylase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q92441 1.31e-39 149 29 7 415 3 MET17 Homocysteine/cysteine synthase Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
P18949 2.79e-38 144 28 7 395 3 metC Cystathionine beta-lyase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44527 1.12e-36 140 26 7 393 3 metC Cystathionine beta-lyase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P06721 9.83e-36 137 27 7 400 1 metC Cystathionine beta-lyase MetC Escherichia coli (strain K12)
P06106 1.06e-35 139 29 9 419 1 MET17 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O42851 1.72e-34 134 31 13 391 1 SPAC23A1.14c Uncharacterized trans-sulfuration enzyme C23A1.14c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P38716 2.76e-34 133 29 14 396 1 YHR112C Uncharacterized trans-sulfuration enzyme YHR112C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P43623 1.61e-31 125 27 4 322 1 IRC7 Putative cystathionine beta-lyase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P38675 6.7e-16 82 28 6 259 3 met-7 Cystathionine gamma-synthase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
O74314 3.74e-14 77 26 8 321 3 SPBC15D4.09c Probable cystathionine gamma-synthase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
G8XHD7 1.37e-10 66 27 10 296 1 besB L-2-amino-4-chloropent-4-enoate dechlorinase/desaturase Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Q04533 1.41e-10 66 26 9 258 1 YML082W Putative cystathionine gamma-synthase YML082W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A0C2WKN7 1.74e-10 66 23 10 322 2 iboG1 Cystathionine gamma-synthase-like enzyme iboG1 Amanita muscaria (strain Koide BX008)
Q12198 1.97e-10 65 27 9 254 1 HSU1 Homocysteine/cysteine synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P47164 2.72e-09 62 27 10 255 1 STR2 Cystathionine gamma-synthase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A2I1D2M7 4.49e-07 55 24 11 341 3 ungC' Alanine racemase ungC' Aspergillus campestris (strain IBT 28561)
A0A2V5GUR2 4.1e-06 52 23 9 267 1 ungC Alanine racemase ungC Aspergillus violaceofuscus (strain CBS 115571)
A0A397HQN2 9.1e-06 51 22 10 293 1 ankD Cystathionine gamma-synthase-like protein ankD Aspergillus thermomutatus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17045
Feature type CDS
Gene metB
Product cystathionine gamma-synthase
Location 36479 - 37639 (strand: -1)
Length 1161 (nucleotides) / 386 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1753
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01053 Cys/Met metabolism PLP-dependent enzyme

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0626 Amino acid transport and metabolism (E) E Cystathionine beta-lyase/cystathionine gamma-synthase

Protein Sequence

MTRKPATAAIHNGLNEEHQFGCVVPPVYLSSTYNFPEFDCPREHDYSRRGNPGRDITGRTLAELEGGAGAVVTSSGMSALHLLFTVFLSPGDVIVAPHDCYGGTYRLLDSCQQHGHFSVRFTDMNDDAALSAALAEKPKLVLIETPGNPLLRITDIAAVSEKAHQAGALVAADNTFLSPVLQQPLALGADFVIHSCTKYLNGHSDVVAGVVIAASEAYTETLSWWANNIGVTLGAFDSYLLLRGIRTLVPRIRLQEENARAIVACLAQQPMVKKIYYPGLETHPGHALAAKQQKGFGAMLSFDINGDKATISRFLSHLSLFTLAESLGGVETLISHAATMTHAGMPEQARKAAGISDTLLRISAGIEDSGDLTAALEHAFQSVTKG

Flanking regions ( +/- flanking 50bp)

AGCTGAGGATATGCTGATATCTCATTCAGGTTATTGAGAGGAACAGCGGTATGACGCGCAAACCTGCCACTGCGGCAATACATAACGGACTTAATGAGGAGCACCAGTTTGGCTGTGTTGTGCCGCCGGTTTATCTCTCATCAACCTATAATTTTCCGGAATTTGACTGCCCGCGTGAGCATGACTATTCGCGCCGTGGCAATCCCGGACGGGATATTACCGGGCGCACACTGGCAGAGCTGGAAGGGGGAGCCGGGGCAGTCGTGACCAGCAGCGGCATGTCAGCGCTGCACCTGCTGTTTACCGTTTTTTTGTCACCGGGCGATGTGATTGTCGCACCTCATGACTGTTACGGCGGTACTTACCGGTTGCTGGACAGTTGTCAGCAGCACGGGCATTTTTCTGTCCGTTTTACGGATATGAATGATGATGCCGCGCTTAGTGCTGCACTGGCGGAAAAACCAAAACTGGTATTGATTGAAACGCCGGGTAATCCGTTGCTGCGGATAACGGATATTGCGGCGGTCAGTGAAAAAGCGCATCAGGCGGGTGCACTGGTTGCGGCAGATAATACGTTTCTGAGCCCGGTGTTACAGCAGCCGCTGGCGCTGGGGGCGGATTTTGTTATTCACTCCTGCACAAAATATCTGAACGGACATTCTGATGTGGTGGCAGGTGTGGTGATTGCCGCGTCAGAAGCGTATACCGAAACACTGAGCTGGTGGGCGAATAATATCGGCGTTACGCTCGGCGCGTTTGATAGTTATCTGCTGTTGCGCGGAATACGCACATTGGTTCCGCGTATCCGGTTGCAGGAGGAAAATGCCCGTGCCATTGTAGCTTGCCTGGCACAACAGCCGATGGTGAAAAAGATATATTATCCGGGACTGGAGACACATCCCGGGCATGCACTGGCAGCAAAACAGCAGAAAGGATTCGGTGCAATGCTCAGTTTTGACATTAATGGGGATAAAGCCACCATTTCCCGCTTTTTATCTCACCTGTCTCTCTTTACACTAGCAGAGTCATTAGGTGGCGTGGAAACGCTGATTTCCCACGCGGCGACCATGACACACGCAGGTATGCCGGAGCAGGCACGCAAGGCTGCGGGAATTTCAGATACATTATTACGTATTTCTGCGGGGATCGAGGACAGCGGTGATTTGACTGCGGCCCTGGAGCACGCATTTCAGTCAGTGACTAAGGGGTAAGGGTAACCATGAGTGCTTTGGCGATTGATGAGTCAGAAAAAGGGCGTCAG