Orthogroup:group_237


Homologs in group_237

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01785 FBDBKF_01785 Morganella morganii S1 endA Endonuclease I
EHELCC_02255 EHELCC_02255 Morganella morganii S2 endA Endonuclease I
NLDBIP_01205 NLDBIP_01205 Morganella morganii S4 endA Endonuclease I
LHKJJB_00830 LHKJJB_00830 Morganella morganii S3 endA Endonuclease I
HKOGLL_00870 HKOGLL_00870 Morganella morganii S5 endA Endonuclease I
F4V73_RS04110 F4V73_RS04110 Morganella psychrotolerans - endonuclease
PMI_RS06970 PMI_RS06970 Proteus mirabilis HI4320 - endonuclease
PMI_RS12120 PMI_RS12120 Proteus mirabilis HI4320 - endonuclease

Distribution of group_237 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_237 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_237

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_237.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 endA 5
2 - 3

Product

# Product Occurence
1 Endonuclease I 5
2 endonuclease 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2356 8 L Replication, recombination and repair (L) Endonuclease I

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01150 8 deoxyribonuclease I [EC:3.1.21.1] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02805 5 Metal binding domain of Ada
PF04231 8 Endonuclease I

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
Endonuclease-1 3
Extracellular deoxyribonuclease 3
Extracellular endonuclease 1
Extracellular ribonuclease 2
Nuclease NucM 1
Periplasmic deoxyribonuclease 1

Protein length

Min length 224
Max length 334
Mean length (sd) 294.8 (32.6)
Median length 295.0

Protein length distribution