Orthogroup:group_1951


Homologs in group_1951

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14645 FBDBKF_14645 Morganella morganii S1 ycfJ Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain
EHELCC_15450 EHELCC_15450 Morganella morganii S2 ycfJ Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain
NLDBIP_15980 NLDBIP_15980 Morganella morganii S4 ycfJ Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain
LHKJJB_15860 LHKJJB_15860 Morganella morganii S3 ycfJ Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain
HKOGLL_14980 HKOGLL_14980 Morganella morganii S5 ycfJ Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain
F4V73_RS07440 F4V73_RS07440 Morganella psychrotolerans - UmoD
PMI_RS04300 PMI_RS04300 Proteus mirabilis HI4320 umoD flagellar biogenesis regulator UmoD

Distribution of group_1951 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1951 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1951

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1951.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ycfJ 5
2 - 1
3 umoD 1

Product

# Product Occurence
1 Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain 5
2 UmoD 1
3 flagellar biogenesis regulator UmoD 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3134 7 S Function unknown (S) Uncharacterized conserved protein YcfJ, contains glycine zipper 2TM domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein YcfJ 3

Protein length

Min length 113
Max length 166
Mean length (sd) 143.4 (15.5)
Median length 145.0

Protein length distribution