Homologs in group_51

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09045 FBDBKF_09045 32.0 Morganella morganii S1 - Fimbria A protein
EHELCC_10365 EHELCC_10365 32.0 Morganella morganii S2 - Fimbria A protein
NLDBIP_10710 NLDBIP_10710 32.0 Morganella morganii S4 - Fimbria A protein
LHKJJB_10645 LHKJJB_10645 32.0 Morganella morganii S3 - Fimbria A protein
HKOGLL_13705 HKOGLL_13705 32.0 Morganella morganii S5 - Fimbria A protein
F4V73_RS10925 F4V73_RS10925 33.7 Morganella psychrotolerans - fimbrial protein
PMI_RS01230 PMI_RS01230 29.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01275 PMI_RS01275 30.8 Proteus mirabilis HI4320 mrpA MR/P fimbria major subunit MrpA
PMI_RS01435 PMI_RS01435 23.0 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01455 PMI_RS01455 18.3 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09265 PMI_RS09265 28.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10950 PMI_RS10950 20.5 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10955 PMI_RS10955 32.8 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_51

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_51

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P04740 2.26e-20 86 35 8 188 3 KS71A KS71A fimbrillin Escherichia coli
P04127 1.22e-19 84 35 10 197 1 papA Pap fimbrial major pilin protein Escherichia coli
P13421 4.01e-18 80 34 7 192 1 smfA Fimbria A protein Serratia marcescens
P42184 4.37e-18 80 34 6 164 1 prsA PRS fimbrial major pilin protein (Fragment) Escherichia coli
Q03011 2.07e-15 73 30 6 189 1 mrpA Major MR/P fimbria protein Proteus mirabilis (strain HI4320)
P62607 3.3e-15 73 33 4 163 3 F7-2 F7-2 fimbrial protein Escherichia coli
P62608 3.3e-15 73 33 4 163 3 F7-2 F7-2 fimbrial protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q47223 2.09e-06 49 33 4 115 1 fimA Type-1 fimbrial protein, A chain Escherichia coli
Q04681 2.4e-06 49 28 5 196 1 pmfA Major fimbrial subunit Proteus mirabilis (strain HI4320)
P12903 3.2e-06 48 31 6 138 1 fim Fimbrial subunit type 1 Klebsiella pneumoniae
P37909 1.59e-05 47 25 8 189 1 ybgD Uncharacterized fimbrial-like protein YbgD Escherichia coli (strain K12)
P62605 2.26e-05 46 28 10 199 3 pilC Type-1 fimbrial protein, C chain Escherichia coli
P62606 2.26e-05 46 28 10 199 3 pilC Type-1 fimbrial protein, C chain Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P39834 0.000114 44 25 6 178 3 ygiL Uncharacterized fimbrial-like protein YgiL Escherichia coli (strain K12)
P21413 0.000115 44 35 3 88 3 fasA Fimbrial protein 987P Escherichia coli
Q8X5K5 0.000232 43 27 7 196 2 lpfA Probable major fimbrial subunit LpfA Escherichia coli O157:H7
P43660 0.000385 42 31 1 76 3 lpfA Long polar fimbria protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P12730 0.000674 42 28 10 197 1 sfaA S-fimbrial protein subunit SfaA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P55223 0.001 41 27 7 173 3 None Fimbrial subunit type 1 Salmonella typhimurium

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01430
Feature type CDS
Gene -
Product fimbrial protein
Location 352973 - 353533 (strand: 1)
Length 561 (nucleotides) / 186 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_51
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKFNKIALTVLLATSAISLNAMADNANTGVITFTGSVVNTPCNIAQSSLKQTVEFGQLSRKALESGKMVEADFDIEFTGCDFTNFGIDATSGKPVPVKSMELVFTGQNYADTANTLLATSAGNTNNLGILIDGFEFGKAKDVLPSITNLKGDNVLTFKALAKAVDASKDVSEGKFSAISNFRITYQ

Flanking regions ( +/- flanking 50bp)

ATCTCAATGTCGGTAAATACTAAAATAGTCAAATATAAAGGAAATGATGTATGAAATTTAATAAAATAGCATTAACAGTTCTATTAGCTACTTCAGCTATTTCTTTAAATGCTATGGCTGATAATGCTAATACAGGTGTTATCACATTTACGGGTTCTGTTGTAAATACGCCTTGTAATATTGCTCAATCTTCACTGAAACAAACAGTTGAGTTTGGCCAACTTTCTCGTAAAGCCTTAGAAAGTGGTAAAATGGTTGAGGCTGATTTTGATATTGAATTTACAGGTTGTGATTTTACTAATTTTGGTATAGATGCCACTAGTGGTAAGCCCGTTCCGGTTAAATCAATGGAACTTGTCTTTACTGGACAAAATTATGCTGATACAGCAAATACATTATTGGCTACTTCTGCTGGTAATACAAATAACTTGGGAATTTTAATTGATGGTTTTGAGTTTGGAAAAGCAAAAGATGTTTTACCAAGTATTACAAATCTAAAGGGTGATAATGTATTAACCTTTAAAGCTCTTGCTAAAGCTGTTGATGCAAGTAAAGATGTTTCTGAAGGTAAATTTAGTGCAATTTCTAATTTCCGTATAACTTATCAGTAATATGAATTAAATTGACTGTTAGTAAATATAAATGCTGGCAGTCAATTTTA