Homologs in group_51

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09045 FBDBKF_09045 23.7 Morganella morganii S1 - Fimbria A protein
EHELCC_10365 EHELCC_10365 23.7 Morganella morganii S2 - Fimbria A protein
NLDBIP_10710 NLDBIP_10710 23.7 Morganella morganii S4 - Fimbria A protein
LHKJJB_10645 LHKJJB_10645 23.7 Morganella morganii S3 - Fimbria A protein
HKOGLL_13705 HKOGLL_13705 23.7 Morganella morganii S5 - Fimbria A protein
F4V73_RS10925 F4V73_RS10925 22.5 Morganella psychrotolerans - fimbrial protein
PMI_RS01230 PMI_RS01230 22.0 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01275 PMI_RS01275 22.5 Proteus mirabilis HI4320 mrpA MR/P fimbria major subunit MrpA
PMI_RS01430 PMI_RS01430 18.3 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01435 PMI_RS01435 19.1 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09265 PMI_RS09265 17.9 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10950 PMI_RS10950 20.6 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10955 PMI_RS10955 21.5 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_51

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_51

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42184 3.1e-09 56 24 2 150 1 prsA PRS fimbrial major pilin protein (Fragment) Escherichia coli
P62532 4.64e-09 56 28 9 184 1 papK Fimbrial adapter PapK Escherichia coli
P62533 4.64e-09 56 28 9 184 3 papK Fimbrial adapter PapK Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q03011 1.57e-08 54 22 3 177 1 mrpA Major MR/P fimbria protein Proteus mirabilis (strain HI4320)
P42191 1.1e-07 52 28 9 184 1 prsK Protein PrsK Escherichia coli
P22595 4.32e-05 45 33 7 129 3 fimA Type-1 fimbrial protein subunit Serratia marcescens
Q04681 5.73e-05 45 21 4 151 1 pmfA Major fimbrial subunit Proteus mirabilis (strain HI4320)
P62607 0.000243 43 21 3 183 3 F7-2 F7-2 fimbrial protein Escherichia coli
P62608 0.000243 43 21 3 183 3 F7-2 F7-2 fimbrial protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P12730 0.000812 41 24 6 175 1 sfaA S-fimbrial protein subunit SfaA Escherichia coli O6:K15:H31 (strain 536 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01455
Feature type CDS
Gene -
Product fimbrial protein
Location 358097 - 358630 (strand: 1)
Length 534 (nucleotides) / 177 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_51
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MNKMVKFLGLISLTICNWQSQALAANNLDVEFSGELISVACQVASESINKKVTLHNLRWQFINENEISKVTHFTIAIDKCSETDLQKSIKLTWKSNELVDIDGNHFLITKGDSGALLGIIDNNGRSVIWNKPMTIGDVSVVDGSQQFEFGVFVRKPAIGEIKIGEFSSIVTFNVEYE

Flanking regions ( +/- flanking 50bp)

TTTACCCACCTTAATGAAAGATCAACATATATTACGTTTAGAGGTAAGTTATGAATAAGATGGTGAAATTTCTAGGGCTTATTTCTTTAACAATATGTAATTGGCAGTCTCAAGCATTAGCGGCCAATAATTTAGATGTTGAATTTAGCGGTGAGTTAATCAGTGTTGCATGCCAAGTCGCTTCAGAATCAATAAATAAAAAAGTTACTTTACACAATCTACGTTGGCAATTTATTAATGAAAATGAAATTAGTAAAGTGACTCATTTCACGATTGCGATTGATAAGTGTAGTGAAACTGACTTACAGAAAAGTATTAAATTAACCTGGAAAAGTAACGAATTAGTTGATATCGATGGTAATCATTTTCTTATTACTAAAGGGGATAGTGGAGCACTATTAGGAATTATTGATAATAATGGAAGGTCTGTTATATGGAATAAACCGATGACAATTGGAGATGTAAGTGTTGTTGATGGTTCACAACAATTTGAGTTTGGTGTTTTTGTCCGTAAGCCAGCAATAGGAGAAATTAAGATTGGTGAATTTTCCAGTATCGTAACTTTTAATGTGGAGTATGAATAGTGCTAATATGGCTAAATAAAATGAAAAATTTATTGGGTGTAGCTTTATTA