Homologs in group_51

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09045 FBDBKF_09045 92.0 Morganella morganii S1 - Fimbria A protein
EHELCC_10365 EHELCC_10365 92.0 Morganella morganii S2 - Fimbria A protein
NLDBIP_10710 NLDBIP_10710 92.0 Morganella morganii S4 - Fimbria A protein
LHKJJB_10645 LHKJJB_10645 92.0 Morganella morganii S3 - Fimbria A protein
HKOGLL_13705 HKOGLL_13705 92.0 Morganella morganii S5 - Fimbria A protein
F4V73_RS10925 F4V73_RS10925 90.3 Morganella psychrotolerans - fimbrial protein
PMI_RS01230 PMI_RS01230 78.9 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01430 PMI_RS01430 30.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01435 PMI_RS01435 23.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01455 PMI_RS01455 22.5 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09265 PMI_RS09265 30.5 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10950 PMI_RS10950 23.7 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10955 PMI_RS10955 34.7 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_51

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_51

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q03011 8.83e-125 351 100 0 175 1 mrpA Major MR/P fimbria protein Proteus mirabilis (strain HI4320)
P13421 1.65e-52 168 58 4 178 1 smfA Fimbria A protein Serratia marcescens
P04740 2.14e-24 96 36 5 175 3 KS71A KS71A fimbrillin Escherichia coli
P42184 2.58e-23 93 36 6 165 1 prsA PRS fimbrial major pilin protein (Fragment) Escherichia coli
P39834 5.25e-21 87 33 5 177 3 ygiL Uncharacterized fimbrial-like protein YgiL Escherichia coli (strain K12)
P62607 3.03e-20 86 33 7 184 3 F7-2 F7-2 fimbrial protein Escherichia coli
P62608 3.03e-20 86 33 7 184 3 F7-2 F7-2 fimbrial protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P04127 7.69e-20 85 34 5 163 1 papA Pap fimbrial major pilin protein Escherichia coli
P53521 2.02e-18 81 32 3 155 3 pmfF Putative minor fimbrial subunit PmfF Proteus mirabilis (strain HI4320)
P43660 9.78e-18 79 35 5 153 3 lpfA Long polar fimbria protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P62605 2.68e-17 78 33 5 182 3 pilC Type-1 fimbrial protein, C chain Escherichia coli
P62606 2.68e-17 78 33 5 182 3 pilC Type-1 fimbrial protein, C chain Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5K5 4.44e-17 77 34 4 141 2 lpfA Probable major fimbrial subunit LpfA Escherichia coli O157:H7
P42191 6.71e-16 74 34 9 173 1 prsK Protein PrsK Escherichia coli
P12730 2.95e-15 72 31 4 181 1 sfaA S-fimbrial protein subunit SfaA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q04681 2.52e-14 70 28 4 184 1 pmfA Major fimbrial subunit Proteus mirabilis (strain HI4320)
P62532 5.36e-14 69 33 9 173 1 papK Fimbrial adapter PapK Escherichia coli
P62533 5.36e-14 69 33 9 173 3 papK Fimbrial adapter PapK Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q47223 8.39e-13 66 32 5 186 1 fimA Type-1 fimbrial protein, A chain Escherichia coli
P12903 5.01e-11 61 34 4 158 1 fim Fimbrial subunit type 1 Klebsiella pneumoniae
P37921 7.62e-11 61 30 6 175 1 fimA Type-1 fimbrial protein, A chain Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P37920 9.02e-11 60 32 6 175 3 fimA Type-1 fimbrial protein, A chain Salmonella typhi
P77288 3.21e-10 59 31 4 185 2 yfcV Uncharacterized fimbrial-like protein YfcV Escherichia coli (strain K12)
P37909 4e-10 59 26 4 173 1 ybgD Uncharacterized fimbrial-like protein YbgD Escherichia coli (strain K12)
P04128 5.34e-10 58 31 4 154 1 fimA Type-1 fimbrial protein, A chain Escherichia coli (strain K12)
P12266 6.76e-10 58 32 4 154 1 None Fimbrial subunit type 1 Klebsiella pneumoniae
P11312 7.49e-10 58 29 7 185 3 F17a-A F17 fimbrial protein Escherichia coli
P55223 9.7e-10 58 30 5 155 3 None Fimbrial subunit type 1 Salmonella typhimurium
P77789 8.91e-09 55 31 9 191 3 ydeS Uncharacterized fimbrial-like protein YdeS Escherichia coli (strain K12)
P22595 1.77e-08 54 35 3 119 3 fimA Type-1 fimbrial protein subunit Serratia marcescens
P39264 2.23e-08 54 30 6 181 1 fimI Fimbrin-like protein FimI Escherichia coli (strain K12)
P21413 9.35e-08 52 28 4 140 3 fasA Fimbrial protein 987P Escherichia coli
P0ABW5 4.98e-07 50 28 6 190 2 sfmA Uncharacterized fimbrial-like protein SfmA Escherichia coli (strain K12)
P0ABW6 4.98e-07 50 28 6 190 3 sfmA Uncharacterized fimbrial-like protein SfmA Escherichia coli O157:H7
P76499 4.77e-06 48 28 6 171 2 yfcP Uncharacterized fimbrial-like protein YfcP Escherichia coli (strain K12)
P25394 1.21e-05 46 26 7 180 3 fedA F107 fimbrial protein Escherichia coli
P45992 2.1e-05 46 28 9 191 3 hifD Minor fimbrial subunit HifD Haemophilus influenzae
P38052 4.69e-05 45 26 5 163 2 sfmF Uncharacterized fimbrial-like protein SfmF Escherichia coli (strain K12)
Q8X582 0.000241 43 25 6 181 1 elfA Laminin-binding fimbrial subunit ElfA Escherichia coli O157:H7
P37926 0.000253 43 26 5 151 3 fimF Fimbrial-like protein FimF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q03846 0.000408 42 33 2 80 3 hifA Major fimbrial subunit Haemophilus influenzae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01275
Feature type CDS
Gene mrpA
Product MR/P fimbria major subunit MrpA
Location 311346 - 311873 (strand: 1)
Length 528 (nucleotides) / 175 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_51
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07345 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042621 MR/P fimbria major subunit MrpA VF1233 Adherence

Protein Sequence

MKLNKLALVLGLGLSVVAGSALAADQGHGTVKFVGSIIDAPCSITPDTENQTVPLGQISTAALKDGGRSNSRDFKISLENCTTETYKTVQTTFTGSEATEVLEGSLGIEGIAKNAAVVITDAGGKQIKLGTPSAAQNLRDGNNDLNFAAYLQGSASEAAVPGDFTAIATFALTYQ

Flanking regions ( +/- flanking 50bp)

AATTAATTATTTTAGATGTCTTCATCCTTTATATTTCAGGAAACAAAAAGATGAAATTAAATAAATTAGCTTTAGTTCTTGGTTTAGGTTTATCTGTTGTTGCGGGTTCTGCTTTAGCTGCAGATCAAGGTCATGGTACTGTTAAATTTGTTGGTTCAATCATTGATGCTCCTTGCTCAATTACTCCTGATACTGAAAATCAAACAGTTCCACTAGGTCAAATTTCTACTGCTGCATTAAAAGATGGTGGCCGTAGTAATTCTCGTGACTTTAAAATCTCTTTAGAAAATTGTACTACAGAGACTTACAAAACTGTTCAAACAACTTTCACTGGCTCTGAAGCAACTGAAGTTTTAGAAGGTTCTTTAGGCATTGAAGGTATCGCTAAAAATGCAGCTGTTGTTATCACCGATGCGGGTGGTAAACAAATCAAATTAGGCACCCCAAGTGCTGCTCAAAACCTGCGTGATGGTAACAATGATCTGAACTTTGCTGCTTATTTACAAGGTTCTGCATCTGAAGCTGCTGTTCCAGGTGACTTTACTGCAATCGCAACTTTCGCACTGACTTATCAGTAAGAAAAAATAAGTTCTGTACAAGGAAGTACAGAGCTTTAATTCCTGTCTTT