Homologs in group_281

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09040 FBDBKF_09040 24.7 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10370 EHELCC_10370 24.7 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10715 NLDBIP_10715 24.7 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10640 LHKJJB_10640 24.7 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13700 HKOGLL_13700 24.7 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS10930 F4V73_RS10930 23.0 Morganella psychrotolerans - type 1 fimbrial protein
PMI_RS01280 PMI_RS01280 25.3 Proteus mirabilis HI4320 mrpB MR/P fimbria assembly terminator MrpB

Distribution of the homologs in the orthogroup group_281

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_281

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42185 1.87e-26 102 29 5 191 3 prsH PRS fimbrial minor pilin protein Escherichia coli
P07111 3.67e-26 102 29 5 191 1 papH PAP fimbrial minor pilin protein Escherichia coli
P43660 1.52e-07 52 28 5 194 3 lpfA Long polar fimbria protein A Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8X582 9.47e-06 47 26 7 193 1 elfA Laminin-binding fimbrial subunit ElfA Escherichia coli O157:H7
P75855 1.03e-05 47 26 7 193 1 elfA Fimbrial subunit ElfA Escherichia coli (strain K12)
P12730 7.76e-05 45 25 5 164 1 sfaA S-fimbrial protein subunit SfaA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8X5K5 8.73e-05 44 26 4 166 2 lpfA Probable major fimbrial subunit LpfA Escherichia coli O157:H7
P39834 0.000224 43 25 6 164 3 ygiL Uncharacterized fimbrial-like protein YgiL Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10950
Feature type CDS
Gene -
Product fimbrial protein
Location 2411363 - 2411929 (strand: -1)
Length 567 (nucleotides) / 188 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_281
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MFKKIIILLFFTKIFSTYASGAVLDKYIPSDKVWWQGTAKFLGKVISPACTLDMDSKYQLVDLGTIPVNKMNNNDDLLASKKIKIKLSDCQFINKTKNIDKVKGVTLTFYSDVSGSKADLFSFNNSDEVYFKIIDEYGYSANSGESLPLIYVDGDNTYLYYKIDVVKKLDVITPGDYYASVLFKINYE

Flanking regions ( +/- flanking 50bp)

AATTTAACGAGAGCAGTTAATCTGCTCTCGATTATTTAAGGCCAAAATCTATGTTTAAAAAAATCATAATATTATTATTTTTCACTAAAATCTTTTCAACATATGCAAGCGGAGCTGTATTGGATAAATATATCCCATCAGATAAAGTTTGGTGGCAAGGAACAGCAAAGTTTTTAGGAAAAGTAATTTCGCCTGCTTGCACATTAGATATGGATAGTAAATATCAATTGGTTGATCTAGGTACTATACCTGTTAATAAAATGAACAATAATGATGATTTATTAGCGAGTAAAAAAATAAAAATAAAATTATCTGATTGCCAATTTATTAATAAGACTAAAAATATCGATAAAGTGAAAGGCGTTACGTTAACATTTTATTCAGATGTTAGTGGATCTAAAGCTGATTTATTTTCATTTAATAACAGTGATGAAGTCTATTTTAAAATAATAGATGAATATGGATATAGCGCTAATTCTGGAGAGTCATTACCATTAATATATGTTGATGGGGATAATACATATCTATATTACAAAATAGACGTTGTAAAAAAGTTGGATGTAATTACTCCTGGTGATTATTATGCAAGCGTTTTATTCAAAATAAATTATGAATGATTAGCTGCTTTCAACTTCTCATTAAAACTTTAAGACTTAAATAATTAAGG