VFG042621


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG042621, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein MR/P fimbria major subunit MrpA
VF ID VF1233
Category Adherence
Protein ID WP_004247325
Vf_category_id VFC0001

Occurence in the database

VFG042621 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_51 FBDBKF_09045 23915 24442 -1 Fimbria A protein Morganella morganii S1
1 group_51 EHELCC_10365 121662 122189 1 Fimbria A protein Morganella morganii S2
2 group_51 NLDBIP_10710 99933 100460 1 Fimbria A protein Morganella morganii S4
3 group_51 LHKJJB_10645 91068 91595 -1 Fimbria A protein Morganella morganii S3
4 group_51 HKOGLL_13705 24369 24896 -1 Fimbria A protein Morganella morganii S5
5 group_51 F4V73_RS10925 326923 327450 1 fimbrial protein Morganella psychrotolerans
6 group_51 PMI_RS01230 302482 303009 1 fimbrial protein Proteus mirabilis HI4320
7 group_51 PMI_RS01275 311346 311873 1 mrpA MR/P fimbria major subunit MrpA Proteus mirabilis HI4320