Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Proteus mirabilis HI4320 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of Pertussis Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the Pertussis pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01330 | complement component 1, r subcomponent [EC:3.4.21.41] | 0 | 0 |
| K01331 | complement component 1, s subcomponent [EC:3.4.21.42] | 0 | 0 |
| K01332 | complement component 2 [EC:3.4.21.43] | 0 | 0 |
| K01370 | caspase 1 [EC:3.4.22.36] | 0 | 0 |
| K02183 | calmodulin | 0 | 0 |
| K02187 | caspase 3 [EC:3.4.22.56] | 0 | 0 |
| K02580 | nuclear factor NF-kappa-B p105 subunit | 0 | 0 |
| K03156 | tumor necrosis factor superfamily, member 2 | 0 | 0 |
| K03175 | TNF receptor-associated factor 6 [EC:2.3.2.27] | 0 | 0 |
| K03986 | complement C1q subcomponent subunit A | 0 | 0 |
| K03987 | complement C1q subcomponent subunit B | 0 | 0 |
| K03988 | complement C1q subcomponent subunit C | 0 | 0 |
| K03989 | complement component 4 | 0 | 0 |
| K03990 | complement component 3 | 0 | 0 |
| K03994 | complement component 5 | 0 | 0 |
| K04001 | C1 inhibitor | 0 | 0 |
| K04002 | complement component 4 binding protein alpha | 0 | 0 |
| K04003 | complement component 4 binding protein beta | 0 | 0 |
| K04371 | mitogen-activated protein kinase 1/3 [EC:2.7.11.24] | 0 | 0 |
| K04379 | proto-oncogene protein c-fos | 0 | 0 |
| K04383 | interleukin 1 alpha | 0 | 0 |
| K04391 | monocyte differentiation antigen CD14 | 0 | 0 |
| K04397 | caspase 7 [EC:3.4.22.60] | 0 | 0 |
| K04440 | mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase) [EC:2.7.11.24] | 0 | 0 |
| K04441 | p38 MAP kinase [EC:2.7.11.24] | 0 | 0 |
| K04448 | transcription factor AP-1 | 0 | 0 |
| K04513 | Ras homolog gene family, member A | 0 | 0 |
| K04519 | interleukin 1 beta | 0 | 0 |
| K04630 | guanine nucleotide-binding protein G(i) subunit alpha | 0 | 0 |
| K04729 | myeloid differentiation primary response protein MyD88 | 0 | 0 |
| K04730 | interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1] | 0 | 0 |
| K04733 | interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1] | 0 | 0 |
| K04735 | transcription factor p65 | 0 | 0 |
| K05400 | lymphocyte antigen 96 | 0 | 0 |
| K05403 | toll-interleukin 1 receptor (TIR) domain-containing adaptor protein | 0 | 0 |
| K05405 | interleukin 6 | 0 | 0 |
| K05406 | interleukin 12A | 0 | 0 |
| K05409 | TRIF-related adaptor molecule | 0 | 0 |
| K05411 | interferon regulatory factor 3 | 0 | 0 |
| K05425 | interleukin 12B | 0 | 0 |
| K05426 | interleukin 23 subunit alpha | 0 | 0 |
| K05443 | interleukin 10 | 0 | 0 |
| K05506 | C-X-C motif chemokine 5/6 | 0 | 0 |
| K05719 | integrin beta 1 | 0 | 0 |
| K05765 | cofilin | 0 | 0 |
| K05842 | toll-like receptor adapter molecule 1 | 0 | 0 |
| K06461 | integrin alpha M | 0 | 0 |
| K06464 | integrin beta 2 | 0 | 0 |
| K06484 | integrin alpha 5 | 0 | 0 |
| K07326 | hemolysin activation/secretion protein | 0 | 1 |
| K07345 | major type 1 subunit fimbrin (pilin) | 11 | 67 |
| K07347 | outer membrane usher protein | 7 | 43 |
| K07389 | cytolysin-activating lysine-acyltransferase [EC:2.3.1.-] | 0 | 2 |
| K07679 | two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] | 0 | 0 |
| K07690 | two-component system, NarL family, response regulator EvgA | 0 | 0 |
| K08727 | nucleotide-binding oligomerization domain-containing protein 1 | 0 | 0 |
| K09444 | interferon regulatory factor 1 | 0 | 0 |
| K10030 | interleukin 8 | 0 | 0 |
| K10067 | pulmonary surfactant-associated protein A | 0 | 0 |
| K10155 | interferon regulatory factor 8 | 0 | 0 |
| K10160 | toll-like receptor 4 | 0 | 0 |
| K11003 | membrane fusion protein, hemolysin D | 0 | 0 |
| K11004 | ATP-binding cassette, subfamily B, bacterial HlyB/CyaB | 0 | 0 |
| K11023 | pertussis toxin subunit 1 [EC:2.4.2.-] | 0 | 2 |
| K11024 | pertussis toxin subunit 2 | 0 | 0 |
| K11025 | pertussis toxin subunit 3 | 0 | 0 |
| K11026 | pertussis toxin subunit 4 | 0 | 0 |
| K11027 | pertussis toxin subunit 5 | 0 | 0 |
| K12340 | outer membrane protein | 1 | 7 |
| K12681 | pertactin | 0 | 0 |
| K12683 | serum resistance protein | 0 | 0 |
| K12688 | autotransporter serine protease [EC:3.4.21.-] | 0 | 0 |
| K12799 | apoptosis-associated speck-like protein containing a CARD | 0 | 0 |
| K12800 | NACHT, LRR and PYD domains-containing protein 3 | 0 | 0 |
| K12973 | lipid IVA palmitoyltransferase [EC:2.3.1.251] | 1 | 7 |
| K13241 | nitric-oxide synthase, inducible [EC:1.14.13.39] | 0 | 0 |
| K15125 | filamentous hemagglutinin | 1 | 3 |
| K15126 | type III secretion system cytotoxic effector protein | 0 | 0 |
| K22944 | bifunctional hemolysin/adenylate cyclase [EC:4.6.1.1] | 0 | 0 |