Homologs in group_34

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13325 FBDBKF_13325 44.6 Morganella morganii S1 araC AraC-type DNA-binding domain and AraC-containing proteins
EHELCC_08770 EHELCC_08770 44.6 Morganella morganii S2 araC AraC-type DNA-binding domain and AraC-containing proteins
NLDBIP_09095 NLDBIP_09095 44.6 Morganella morganii S4 araC AraC-type DNA-binding domain and AraC-containing proteins
LHKJJB_05170 LHKJJB_05170 44.6 Morganella morganii S3 araC AraC-type DNA-binding domain and AraC-containing proteins
HKOGLL_05745 HKOGLL_05745 44.6 Morganella morganii S5 araC AraC-type DNA-binding domain and AraC-containing proteins
F4V73_RS01705 F4V73_RS01705 33.9 Morganella psychrotolerans - AraC family transcriptional regulator
F4V73_RS03430 F4V73_RS03430 45.5 Morganella psychrotolerans - helix-turn-helix domain-containing protein
F4V73_RS04165 F4V73_RS04165 18.9 Morganella psychrotolerans - AraC family transcriptional regulator
F4V73_RS04870 F4V73_RS04870 24.0 Morganella psychrotolerans - AraC family transcriptional regulator
F4V73_RS12525 F4V73_RS12525 32.5 Morganella psychrotolerans - AraC family transcriptional regulator
PMI_RS04495 PMI_RS04495 25.4 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein
PMI_RS05115 PMI_RS05115 47.3 Proteus mirabilis HI4320 - helix-turn-helix domain-containing protein
PMI_RS14600 PMI_RS14600 27.1 Proteus mirabilis HI4320 chbR transcriptional regulator ChbR
PMI_RS18315 PMI_RS18315 21.7 Proteus mirabilis HI4320 - AraC family transcriptional regulator

Distribution of the homologs in the orthogroup group_34

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_34

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P28816 1.32e-35 122 46 0 111 1 tetD Transposon Tn10 TetD protein Escherichia coli
Q52620 2.49e-33 115 49 1 107 4 pqrA Probable transcription factor PqrA Proteus vulgaris
P0ACH7 4.72e-33 115 47 0 98 3 marA Multiple antibiotic resistance protein MarA Shigella flexneri
P0ACH5 4.72e-33 115 47 0 98 1 marA Multiple antibiotic resistance protein MarA Escherichia coli (strain K12)
P0ACH6 4.72e-33 115 47 0 98 3 marA Multiple antibiotic resistance protein MarA Escherichia coli O157:H7
P0A2S4 6.47e-33 114 47 0 98 2 marA Multiple antibiotic resistance protein MarA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2S5 6.47e-33 114 47 0 98 3 marA Multiple antibiotic resistance protein MarA Salmonella typhi
P0A2S6 6.47e-33 114 47 0 98 3 marA Multiple antibiotic resistance protein MarA Salmonella enteritidis
P55922 1.94e-32 113 47 0 106 4 ramA Transcriptional activator RamA Enterobacter cloacae
Q48413 6.53e-32 112 47 0 106 1 ramA Transcriptional activator RamA Klebsiella pneumoniae
A0A0H3GPK2 6.53e-32 112 47 0 106 1 ramA Transcriptional regulator RamA Klebsiella pneumoniae subsp. pneumoniae (strain HS11286)
P0ACI2 4.53e-31 114 47 0 104 3 rob Right origin-binding protein Shigella flexneri
P0ACI0 4.53e-31 114 47 0 104 1 rob Right origin-binding protein Escherichia coli (strain K12)
P0ACI1 4.53e-31 114 47 0 104 3 rob Right origin-binding protein Escherichia coli O157:H7
Q8ZJU7 4.67e-31 114 47 0 104 2 rob Transcriptional regulator Rob Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
H9L484 7.62e-31 109 47 0 106 1 ramA Transcriptional regulator RamA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P43463 1.7e-29 106 39 0 106 4 aarP HTH-type transcriptional activator AarP Providencia stuartii
P0A9E2 1.89e-28 102 41 0 104 1 soxS Regulatory protein SoxS Escherichia coli (strain K12)
P0A9E3 1.89e-28 102 41 0 104 3 soxS Regulatory protein SoxS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9E4 1.89e-28 102 41 0 104 3 soxS Regulatory protein SoxS Escherichia coli O157:H7
Q56143 9.02e-28 101 41 0 104 3 soxS Regulatory protein SoxS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77601 5.08e-24 95 39 0 107 5 ykgA Putative HTH-type transcriptional regulator YkgA Escherichia coli (strain K12)
O31456 4.37e-17 77 39 0 98 3 ybfP Uncharacterized HTH-type transcriptional regulator YbfP Bacillus subtilis (strain 168)
P96662 6.58e-16 74 34 0 100 4 ydeE Uncharacterized HTH-type transcriptional regulator YdeE Bacillus subtilis (strain 168)
Q936F1 1.5e-13 68 34 0 98 4 None Uncharacterized HTH-type transcriptional regulator Staphylococcus aureus
Q5HJR8 3.8e-13 67 33 0 98 4 SACOL0084 Uncharacterized HTH-type transcriptional regulator SACOL0084 Staphylococcus aureus (strain COL)
Q6GD21 4.31e-13 67 33 0 98 4 SAS0078 Uncharacterized HTH-type transcriptional regulator SAS0078 Staphylococcus aureus (strain MSSA476)
Q8NYT6 4.31e-13 67 33 0 98 4 MW0077 Uncharacterized HTH-type transcriptional regulator MW0077 Staphylococcus aureus (strain MW2)
Q6GKK1 4.35e-13 67 33 0 98 4 SAR0107 Uncharacterized HTH-type transcriptional regulator SAR0107 Staphylococcus aureus (strain MRSA252)
Q99XB1 4.48e-13 67 33 0 98 4 SAV0101 Uncharacterized HTH-type transcriptional regulator SAV0101 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q7A882 4.48e-13 67 33 0 98 4 SA0097 Uncharacterized HTH-type transcriptional regulator SA0097 Staphylococcus aureus (strain N315)
Q8ZM00 6.06e-13 66 36 1 94 1 STM3175 Probable HTH-type transcriptional regulator STM3175 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45008 4.99e-12 64 30 0 107 4 HI_1052 Uncharacterized HTH-type transcriptional regulator HI_1052 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O32071 5.98e-12 64 33 0 106 4 ytdP Uncharacterized HTH-type transcriptional regulator YtdP Bacillus subtilis (strain 168)
P26950 6.58e-12 63 36 1 104 4 caf1R F1 operon positive regulatory protein Yersinia pestis
Q9WW32 5.96e-11 61 35 1 95 1 mtrA HTH-type transcriptional regulator MtrA Neisseria gonorrhoeae
P95283 8.13e-11 60 35 0 82 2 Rv1931c HTH-type transcriptional regulator Rv1931c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P35319 4.08e-09 56 28 0 106 4 None Putative AraC-like transcription regulator Streptomyces lividans
P0ACH8 4.09e-09 56 28 0 99 1 melR Melibiose operon regulatory protein Escherichia coli (strain K12)
P0ACH9 4.09e-09 56 28 0 99 3 melR Melibiose operon regulatory protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P19219 4.22e-09 55 30 0 99 1 adaA Bifunctional transcriptional activator/DNA repair enzyme AdaA Bacillus subtilis (strain 168)
A4WG91 8.04e-09 55 28 1 110 3 rhaS HTH-type transcriptional activator RhaS Enterobacter sp. (strain 638)
A8AL27 3e-08 53 28 0 110 3 rhaS HTH-type transcriptional activator RhaS Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q03320 3.07e-08 53 27 0 107 4 None Putative AraC-like transcription regulator Streptomyces antibioticus
O31249 4.28e-08 53 27 0 107 4 alkR HTH-type transcriptional regulator AlkR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P26993 6.1e-08 52 30 0 100 1 exsA HTH-type transcriptional regulator ExsA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O31449 2.28e-07 51 29 1 99 4 ybfI Uncharacterized HTH-type transcriptional regulator YbfI Bacillus subtilis (strain 168)
Q8CXW5 3.34e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q3YV71 3.38e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Shigella sonnei (strain Ss046)
Q83PE0 3.38e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Shigella flexneri
Q0SZ95 3.38e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Shigella flexneri serotype 5b (strain 8401)
Q0TAF8 3.44e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7UNM6 3.44e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B1LMU6 3.51e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain SMS-3-5 / SECEC)
B7N2P7 3.51e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O81 (strain ED1a)
Q32A70 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Shigella dysenteriae serotype 1 (strain Sd197)
Q31U84 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Shigella boydii serotype 4 (strain Sb227)
P09377 3.69e-07 50 26 1 109 1 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain K12)
B1IVH3 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A709 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O9:H4 (strain HS)
B1XB72 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain K12 / DH10B)
C5A073 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain K12 / MC4100 / BW2952)
B7M6V7 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O8 (strain IAI1)
B7L9G1 3.69e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain 55989 / EAEC)
Q1R414 4.4e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain UTI89 / UPEC)
B7NFK3 4.4e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
A1AI82 4.4e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O1:K1 / APEC
B7NUA1 4.4e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7MI37 4.4e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O45:K1 (strain S88 / ExPEC)
Q46855 4.53e-07 50 29 0 98 4 yqhC Uncharacterized HTH-type transcriptional regulator YqhC Escherichia coli (strain K12)
A7ZUB7 4.76e-07 50 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O139:H28 (strain E24377A / ETEC)
B2TVP7 6.14e-07 49 26 1 109 3 rhaS HTH-type transcriptional activator RhaS Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B7LVD8 6.45e-07 49 26 1 117 3 rhaS HTH-type transcriptional activator RhaS Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P77396 7.1e-07 49 26 0 98 4 ypdC Uncharacterized HTH-type transcriptional regulator YpdC Escherichia coli (strain K12)
O87389 8.42e-07 49 28 0 96 4 glxA HTH-type transcriptional regulator GlxA Rhizobium meliloti (strain 1021)
B6I4P8 1.34e-06 48 25 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli (strain SE11)
P54722 1.38e-06 48 28 1 99 4 yfiF Uncharacterized HTH-type transcriptional regulator YfiF Bacillus subtilis (strain 168)
B5XZ49 1.47e-06 48 26 0 100 3 rhaS HTH-type transcriptional activator RhaS Klebsiella pneumoniae (strain 342)
P40408 1.51e-06 48 26 0 93 1 btr HTH-type transcriptional activator Btr Bacillus subtilis (strain 168)
B5YZ43 1.65e-06 48 25 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X897 1.65e-06 48 25 1 109 3 rhaS HTH-type transcriptional activator RhaS Escherichia coli O157:H7
A6TGB0 1.71e-06 48 25 0 87 3 rhaR HTH-type transcriptional activator RhaR Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A6TGA9 1.84e-06 48 26 0 100 3 rhaS HTH-type transcriptional activator RhaS Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q9HTI4 2.44e-06 48 22 0 100 1 gbdR HTH-type transcriptional regulator GbdR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZIC3 2.44e-06 48 22 0 100 1 gbdR HTH-type transcriptional regulator GbdR Pseudomonas aeruginosa (strain UCBPP-PA14)
G3XCU2 2.87e-06 48 24 0 94 4 argR HTH-type transcriptional regulator ArgR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q65Q30 3.01e-06 47 30 1 73 3 rhaR HTH-type transcriptional activator RhaR Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
B4TPQ9 3.64e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella schwarzengrund (strain CVM19633)
Q05587 3.73e-06 47 23 0 97 1 pocR Regulatory protein PocR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A1JU91 6.19e-06 47 28 0 92 3 virF Virulence regulon transcriptional activator VirF Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P0A2S9 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2T0 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella typhi
C0Q3L4 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella paratyphi C (strain RKS4594)
A9MZC8 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4SZZ3 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella newport (strain SL254)
B5RFC3 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QWY4 6.73e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella enteritidis PT4 (strain P125109)
B5FPP5 6.8e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella dublin (strain CT_02021853)
B4TBY3 7e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella heidelberg (strain SL476)
B5F0M9 7e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella agona (strain SL483)
B5BJG8 7.35e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella paratyphi A (strain AKU_12601)
Q5PKG2 7.35e-06 47 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57HG8 7.49e-06 46 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella choleraesuis (strain SC-B67)
A9MI64 7.64e-06 46 24 0 100 3 rhaS HTH-type transcriptional activator RhaS Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q66FF1 1.02e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pseudotuberculosis serotype I (strain IP32953)
A7FN79 1.02e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P0C2V5 1.07e-05 46 28 0 92 2 virF Virulence regulon transcriptional activator VirF Yersinia enterocolitica
A4TRS7 1.16e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pestis (strain Pestoides F)
Q1CEB6 1.16e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pestis bv. Antiqua (strain Nepal516)
A9QYR6 1.16e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZIZ9 1.16e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pestis
B2K1W6 1.16e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C0W2 1.16e-05 46 30 1 83 3 rhaR HTH-type transcriptional activator RhaR Yersinia pestis bv. Antiqua (strain Antiqua)
P28808 1.31e-05 46 28 0 92 4 lcrF Thermoregulatory protein LcrF Yersinia pestis
B1JNC4 1.47e-05 45 29 0 71 3 rhaR HTH-type transcriptional activator RhaR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q00753 2.27e-05 45 25 0 110 4 msmR Msm operon regulatory protein Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Q47129 2.61e-05 45 26 3 106 1 feaR Transcriptional activator FeaR Escherichia coli (strain K12)
Q5HKE0 2.68e-05 45 30 1 100 3 SERP2406 Uncharacterized response regulatory protein SERP2406 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
C6DJR5 2.98e-05 45 25 1 112 3 rhaR HTH-type transcriptional activator RhaR Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q66FF2 3.7e-05 44 25 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pseudotuberculosis serotype I (strain IP32953)
A9QYR8 3.85e-05 44 25 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pestis bv. Antiqua (strain Angola)
B1JNC5 3.96e-05 44 25 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
A4TRS8 3.96e-05 44 25 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pestis (strain Pestoides F)
B2K1W5 3.96e-05 44 25 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FN80 3.96e-05 44 25 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q8CQE3 4.08e-05 44 30 1 99 3 SE_0165 Uncharacterized response regulatory protein SE_0165 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
O33813 4.67e-05 44 24 0 95 4 lacR Lactose operon transcription activator Staphylococcus xylosus
Q6DA21 4.8e-05 44 24 0 95 3 rhaR HTH-type transcriptional activator RhaR Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q51872 9.1e-05 43 26 1 100 4 lumQ Probable transcriptional regulator LumQ Photobacterium leiognathi
Q65Q31 0.000137 43 26 0 92 3 rhaS HTH-type transcriptional activator RhaS Mannheimia succiniciproducens (strain KCTC 0769BP / MBEL55E)
Q1CEB5 0.000184 42 24 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZJ00 0.000184 42 24 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pestis
Q1C0W1 0.000184 42 24 0 98 3 rhaS HTH-type transcriptional activator RhaS Yersinia pestis bv. Antiqua (strain Antiqua)
P28809 0.000237 42 18 0 101 4 mmsR MmsAB operon regulatory protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q6DA22 0.000365 42 24 0 113 3 rhaS HTH-type transcriptional activator RhaS Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q8NYJ9 0.000788 40 27 1 100 3 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain MW2)
Q6GCQ3 0.000788 40 27 1 100 3 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain MSSA476)
Q5HJF7 0.000788 40 27 1 100 2 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain COL)
Q2G1E1 0.000788 40 27 1 100 1 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FK47 0.000788 40 27 1 100 3 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain USA300)
C6DJR4 0.000798 40 25 0 104 3 rhaS HTH-type transcriptional activator RhaS Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q7A7X9 0.000812 40 27 1 100 1 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain N315)
Q99X00 0.000812 40 27 1 100 3 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q6GK93 0.00082 40 27 1 100 3 hptR Transcriptional regulatory protein HptR Staphylococcus aureus (strain MRSA252)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17025
Feature type CDS
Gene -
Product helix-turn-helix domain-containing protein
Location 29565 - 29939 (strand: 1)
Length 375 (nucleotides) / 124 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_34
Orthogroup size 15
N. genomes 7

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Genomic region

Domains

PF12833 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2207 Transcription (K) K AraC-type DNA-binding domain and AraC-containing proteins

Protein Sequence

MDNNALRKNIVNDILIWIEKNVDKPLNIETISDKAGYSKWHFQRIFKNVVGVSLGEYLLTRRLLKVSSDLKETDDKIMDIAVRYGFDSQQELTRSFKRILKLTPGKYRKNILSRYIPNVIQDAK

Flanking regions ( +/- flanking 50bp)

CTATGTGATATTTTATAAATAACGTTCCTCTGCTCACAAGGAAATTAACTATGGATAATAATGCCTTACGTAAAAACATTGTAAATGACATTCTTATCTGGATTGAAAAAAATGTAGATAAGCCACTTAATATTGAAACAATATCTGATAAAGCAGGTTACTCAAAATGGCATTTTCAGCGGATATTTAAAAATGTTGTCGGGGTTAGTTTAGGTGAGTATCTTTTAACAAGAAGACTACTGAAGGTATCATCTGATCTGAAAGAAACCGATGATAAAATCATGGATATCGCAGTCAGATATGGTTTTGACAGCCAGCAGGAATTAACCAGGTCATTTAAGCGAATACTGAAGTTAACACCAGGAAAGTATAGAAAAAACATATTATCAAGGTATATACCCAACGTCATTCAAGATGCAAAATAACGCTGAACCATGACCGGGAAATTAAACTAAATTACGGGTAAATTAAATAC