Homologs in group_970

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05355 FBDBKF_05355 100.0 Morganella morganii S1 ugd UDP-glucose 6-dehydrogenase
NLDBIP_12575 NLDBIP_12575 100.0 Morganella morganii S4 ugd UDP-glucose 6-dehydrogenase
LHKJJB_12435 LHKJJB_12435 100.0 Morganella morganii S3 ugd UDP-glucose 6-dehydrogenase
HKOGLL_11050 HKOGLL_11050 100.0 Morganella morganii S5 ugd UDP-glucose 6-dehydrogenase
F4V73_RS05810 F4V73_RS05810 93.7 Morganella psychrotolerans - UDP-glucose/GDP-mannose dehydrogenase family protein
PMI_RS15770 PMI_RS15770 31.7 Proteus mirabilis HI4320 - nucleotide sugar dehydrogenase

Distribution of the homologs in the orthogroup group_970

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_970

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O86422 6.26e-154 447 50 2 444 3 udg UDP-glucose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O54068 1.17e-131 389 48 7 443 1 rkpK UDP-glucose 6-dehydrogenase Rhizobium meliloti (strain 1021)
O32271 4e-131 389 45 4 440 1 tuaD UDP-glucose 6-dehydrogenase TuaD Bacillus subtilis (strain 168)
P96718 3.41e-127 378 45 4 443 1 ywqF UDP-glucose 6-dehydrogenase YwqF Bacillus subtilis (strain 168)
Q1RKF8 2.21e-104 320 38 3 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia bellii (strain RML369-C)
O34862 3.99e-103 316 39 7 443 3 ytcA Putative UDP-glucose 6-dehydrogenase YtcA Bacillus subtilis (strain 168)
Q4UK39 2.72e-99 307 36 3 445 3 udg UDP-glucose 6-dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92GB1 8.13e-97 300 37 4 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q68VX0 4.6e-96 298 36 3 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O05973 9.57e-96 298 35 3 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia prowazekii (strain Madrid E)
D4GYH5 6.35e-79 254 37 9 429 1 aglM UDP-glucose 6-dehydrogenase AglM Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
O02373 3.52e-76 248 34 12 470 1 sgl UDP-glucose 6-dehydrogenase Drosophila melanogaster
Q9AUV6 2.69e-75 246 34 12 474 2 UGD3 UDP-glucose 6-dehydrogenase 3 Oryza sativa subsp. japonica
Q2QS13 3.31e-74 243 33 12 474 2 UGD5 UDP-glucose 6-dehydrogenase 5 Oryza sativa subsp. japonica
B7F958 4.85e-74 243 34 13 474 2 UGD2 UDP-glucose 6-dehydrogenase 2 Oryza sativa subsp. japonica
Q2QS14 1.41e-73 241 33 12 474 2 UGD4 UDP-glucose 6-dehydrogenase 4 Oryza sativa subsp. japonica
Q9FZE1 6.4e-73 240 32 10 475 1 UGD1 UDP-glucose 6-dehydrogenase 1 Arabidopsis thaliana
Q5F3T9 3.35e-72 238 35 14 477 2 UGDH UDP-glucose 6-dehydrogenase Gallus gallus
Q75GS4 3.7e-72 238 33 13 475 3 UGD1 UDP-glucose 6-dehydrogenase 1 Oryza sativa subsp. japonica
O60701 3.35e-71 236 34 12 473 1 UGDH UDP-glucose 6-dehydrogenase Homo sapiens
Q5R7B3 4.7e-71 235 34 12 473 2 UGDH UDP-glucose 6-dehydrogenase Pongo abelii
P12378 8.87e-71 235 34 13 469 1 UGDH UDP-glucose 6-dehydrogenase Bos taurus
O70475 2.64e-70 233 34 13 472 1 Ugdh UDP-glucose 6-dehydrogenase Mus musculus
O70199 3.7e-70 233 34 13 469 1 Ugdh UDP-glucose 6-dehydrogenase Rattus norvegicus
Q19905 4.88e-70 233 34 16 464 1 sqv-4 UDP-glucose 6-dehydrogenase Caenorhabditis elegans
Q96558 1.73e-69 231 31 11 473 2 UGD1 UDP-glucose 6-dehydrogenase 1 Glycine max
Q9FM01 2.38e-69 231 32 11 473 1 UGD4 UDP-glucose 6-dehydrogenase 4 Arabidopsis thaliana
Q9LF33 1.05e-67 226 31 11 473 1 UGD3 UDP-glucose 6-dehydrogenase 3 Arabidopsis thaliana
Q9LIA8 5.81e-67 224 31 11 473 1 UGD2 UDP-glucose 6-dehydrogenase 2 Arabidopsis thaliana
Q58454 7.24e-63 221 40 7 313 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58454 1.35e-29 125 38 4 184 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q88NC4 3.85e-61 208 33 7 415 3 algD GDP-mannose 6-dehydrogenase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
O07299 3.43e-59 203 31 7 415 3 algD GDP-mannose 6-dehydrogenase Pseudomonas savastanoi pv. phaseolicola
Q887P8 2.19e-58 201 31 7 415 2 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
P11759 2.61e-58 200 33 5 373 1 algD GDP-mannose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P59793 3e-58 200 31 7 415 3 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. syringae
P51585 1.14e-54 191 33 5 365 3 algD GDP-mannose 6-dehydrogenase Azotobacter vinelandii
O59284 1.22e-44 164 28 11 447 1 PH1618 UDP-N-acetyl-D-mannosamine dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
A6VK13 3.94e-43 160 27 12 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q6LZC3 7.6e-43 159 27 11 448 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
Q45410 2.29e-42 157 29 14 446 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia solanacearum
A6USK4 6.49e-42 156 27 11 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
A4FY94 1.83e-41 155 26 11 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
P58591 3.23e-41 154 29 11 435 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q04873 3.68e-40 151 29 9 386 3 udg UDP-glucose 6-dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P76373 1.13e-38 147 26 7 377 1 ugd UDP-glucose 6-dehydrogenase Escherichia coli (strain K12)
Q7DBF9 2.63e-38 146 26 7 377 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O157:H7
Q57871 2.91e-38 147 25 11 449 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8FG45 5.6e-38 145 26 7 377 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q47329 3.87e-37 143 28 9 361 3 kfiD UDP-glucose 6-dehydrogenase Escherichia coli
Q04872 7.76e-37 142 30 12 372 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O111:H-
O33952 2.17e-36 140 28 11 382 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli
P37791 1.2e-35 138 25 7 384 5 udg Putative UDP-glucose 6-dehydrogenase Shigella flexneri
Q0P8H3 2.17e-35 138 26 11 388 1 kfiD UDP-glucose 6-dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P67067 1.61e-33 133 28 13 428 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Shigella flexneri
P27829 1.61e-33 133 28 13 428 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli (strain K12)
P67066 1.61e-33 133 28 13 428 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli O157:H7
A6UU98 1.76e-33 134 24 12 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
P0DG69 1.53e-30 125 26 9 372 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DG68 2.64e-30 124 26 9 372 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
P0C0F5 3.55e-30 124 26 9 372 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M1
Q8ZAE4 4.1e-30 124 27 13 430 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Yersinia pestis
P0C0F4 1.27e-29 122 26 9 372 1 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes
Q8NKX0 1.27e-29 122 26 9 372 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M18 (strain MGAS8232)
Q5X9A8 1.27e-29 122 26 9 372 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8Z389 1.85e-29 122 28 11 390 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhi
Q9L6R4 8.93e-29 120 28 11 390 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57346 1.13e-28 119 27 10 368 3 cap3A UDP-glucose 6-dehydrogenase Streptococcus pneumoniae
G3XD94 2.19e-23 105 27 14 431 1 wbpA UDP-N-acetyl-D-glucosamine 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P39861 1.94e-20 96 25 12 429 3 capL Protein CapL Staphylococcus aureus
Q04972 3.35e-19 92 24 12 436 3 vipA Vi polysaccharide biosynthesis protein VipA/TviB Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_12235
Feature type CDS
Gene ugd
Product UDP-glucose 6-dehydrogenase
Location 100361 - 101704 (strand: 1)
Length 1344 (nucleotides) / 447 (amino acids)

Contig

Accession ZDB_221
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_970
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1004 Cell wall/membrane/envelope biogenesis (M) M UDP-glucose 6-dehydrogenase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG037990 UDP-glucose/GDP-mannose dehydrogenase family protein VF0465 Immune modulation

Protein Sequence

MKVTVFGIGYVGLVQATVLAEVGHDVMCVDVDAKKVENLKNGVIPIFEPGLTPLVKKNYEEGRLSFTTDAALGVAHGTLQFIAVGTPPDEDGSADLQYVTAVARTIAQHMQDYKVVIDKSTVPVGTADKVNATIKATLAERGADIAYDVVSNPEFLKEGAAVADCMRPERIVIGCDNDRVIDIIRELYEPFNRNHDRMIVMDIRSAELTKYAANCMLATKISFMNEISNLAEMLGADIENVRQGIGSDSRIGYHFIYPGCGYGGSCFPKDVQALIRTAEHIGFTPRILRAVEEVNEQQKYKLPSFIKRHFGENLEGKTFAVWGLSFKPNTDDMREASSRILLQELWAAGAKVQAYDPEAMQEAQRIFGLRDDLALMGTKEAALHNADALVICTEWQSFRAPDFDAIKAGLKTPVIFDGRNLYDPERLENRGFIYYGIGRGASINPVI

Flanking regions ( +/- flanking 50bp)

AGACTGGCTGAAAACATTACAGAATTAATAATTGTTGCAATAGGTGAACTATGAAAGTAACCGTATTTGGAATCGGATATGTCGGTCTGGTGCAGGCGACTGTACTGGCGGAAGTCGGCCATGATGTCATGTGTGTCGATGTTGATGCAAAAAAAGTGGAAAACCTGAAAAATGGTGTGATCCCGATTTTTGAACCGGGCCTGACCCCGCTGGTGAAGAAAAACTATGAAGAAGGCCGTTTAAGCTTCACCACGGATGCGGCACTGGGTGTGGCACACGGCACACTGCAATTCATCGCGGTCGGTACACCGCCGGATGAAGACGGCTCTGCGGATCTGCAATATGTCACCGCGGTTGCCCGCACTATTGCACAGCATATGCAGGACTACAAAGTGGTTATCGATAAATCCACCGTTCCGGTCGGTACCGCGGATAAAGTTAACGCCACGATTAAAGCCACACTGGCTGAACGCGGCGCGGATATTGCCTATGACGTGGTGTCCAACCCTGAATTCCTGAAGGAAGGGGCGGCGGTTGCTGACTGCATGCGTCCTGAGCGCATTGTTATCGGCTGTGATAATGATCGTGTTATCGATATTATCCGCGAACTGTATGAGCCGTTTAACCGTAATCACGACCGCATGATTGTGATGGATATCCGCAGTGCGGAGCTGACCAAATACGCGGCAAACTGCATGCTGGCGACAAAAATCAGCTTTATGAATGAGATCTCCAACCTGGCGGAAATGCTGGGCGCGGATATTGAGAATGTGCGCCAGGGTATCGGTTCTGACTCCCGTATCGGTTATCACTTTATTTATCCGGGCTGCGGCTACGGTGGTTCCTGCTTCCCGAAAGACGTGCAGGCGCTGATCCGCACCGCGGAACATATCGGCTTTACCCCGCGCATTCTGCGTGCGGTGGAAGAAGTGAACGAACAGCAGAAATACAAACTGCCGTCCTTTATCAAACGTCATTTCGGTGAAAACCTGGAAGGTAAAACCTTCGCGGTCTGGGGTCTGTCTTTTAAACCGAATACCGATGATATGCGTGAAGCCTCCAGTCGTATCCTGTTACAGGAATTATGGGCCGCCGGTGCCAAAGTTCAGGCGTATGACCCGGAAGCGATGCAGGAAGCGCAGCGTATTTTCGGGCTGCGTGATGACCTGGCGCTGATGGGCACCAAAGAAGCGGCACTGCATAATGCGGATGCACTGGTTATCTGCACTGAGTGGCAGAGTTTCCGTGCGCCGGACTTCGATGCTATCAAAGCAGGACTGAAAACCCCGGTTATTTTTGACGGACGTAACCTTTATGACCCGGAACGTTTAGAAAATCGCGGCTTTATCTATTATGGTATAGGCCGTGGTGCTTCCATTAATCCGGTAATCTGAGTCTGAATATGAAAATACTTGTAACCGGCGCGGCTGGTTTTATTGGTTAT