Orthogroup:group_970


Homologs in group_970

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05355 FBDBKF_05355 Morganella morganii S1 ugd UDP-glucose 6-dehydrogenase
EHELCC_12235 EHELCC_12235 Morganella morganii S2 ugd UDP-glucose 6-dehydrogenase
NLDBIP_12575 NLDBIP_12575 Morganella morganii S4 ugd UDP-glucose 6-dehydrogenase
LHKJJB_12435 LHKJJB_12435 Morganella morganii S3 ugd UDP-glucose 6-dehydrogenase
HKOGLL_11050 HKOGLL_11050 Morganella morganii S5 ugd UDP-glucose 6-dehydrogenase
F4V73_RS05810 F4V73_RS05810 Morganella psychrotolerans - UDP-glucose/GDP-mannose dehydrogenase family protein
PMI_RS15770 PMI_RS15770 Proteus mirabilis HI4320 - nucleotide sugar dehydrogenase

Distribution of group_970 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_970 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_970

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_970.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ugd 5
2 - 2

Product

# Product Occurence
1 UDP-glucose 6-dehydrogenase 5
2 UDP-glucose/GDP-mannose dehydrogenase family protein 1
3 nucleotide sugar dehydrogenase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1004 7 M Cell wall/membrane/envelope biogenesis (M) UDP-glucose 6-dehydrogenase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00984 7 UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF03720 7 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 7 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG037990 6 UDP-glucose/GDP-mannose dehydrogenase family protein VF0465 Immune modulation
VFG048973 1 UDP-glucose 6-dehydrogenase VF0560 Immune modulation

Annotations of the 70 SwissProt hits

Annotation Number of occurrences
GDP-mannose 6-dehydrogenase 6
NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase 2
Protein CapL 1
Putative UDP-glucose 6-dehydrogenase 1
Putative UDP-glucose 6-dehydrogenase YtcA 1
UDP-N-acetyl-D-glucosamine 6-dehydrogenase 1
UDP-N-acetyl-D-mannosamine dehydrogenase 13
UDP-glucose 6-dehydrogenase 30
UDP-glucose 6-dehydrogenase 1 3
UDP-glucose 6-dehydrogenase 2 2
UDP-glucose 6-dehydrogenase 3 2
UDP-glucose 6-dehydrogenase 4 2
UDP-glucose 6-dehydrogenase 5 1
UDP-glucose 6-dehydrogenase AglM 1
UDP-glucose 6-dehydrogenase TuaD 1
UDP-glucose 6-dehydrogenase YwqF 1
Uncharacterized protein MJ1054 1
Vi polysaccharide biosynthesis protein VipA/TviB 1

Protein length

Min length 388
Max length 447
Mean length (sd) 438.6 (22.3)
Median length 447.0

Protein length distribution