Homologs in group_970

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05355 FBDBKF_05355 93.7 Morganella morganii S1 ugd UDP-glucose 6-dehydrogenase
EHELCC_12235 EHELCC_12235 93.7 Morganella morganii S2 ugd UDP-glucose 6-dehydrogenase
NLDBIP_12575 NLDBIP_12575 93.7 Morganella morganii S4 ugd UDP-glucose 6-dehydrogenase
LHKJJB_12435 LHKJJB_12435 93.7 Morganella morganii S3 ugd UDP-glucose 6-dehydrogenase
HKOGLL_11050 HKOGLL_11050 93.7 Morganella morganii S5 ugd UDP-glucose 6-dehydrogenase
PMI_RS15770 PMI_RS15770 32.0 Proteus mirabilis HI4320 - nucleotide sugar dehydrogenase

Distribution of the homologs in the orthogroup group_970

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_970

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O86422 1.82e-153 446 50 1 442 3 udg UDP-glucose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O32271 2.92e-132 392 45 4 440 1 tuaD UDP-glucose 6-dehydrogenase TuaD Bacillus subtilis (strain 168)
O54068 6.96e-131 387 47 6 444 1 rkpK UDP-glucose 6-dehydrogenase Rhizobium meliloti (strain 1021)
P96718 4.67e-126 375 45 4 443 1 ywqF UDP-glucose 6-dehydrogenase YwqF Bacillus subtilis (strain 168)
Q1RKF8 9.17e-107 326 38 3 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia bellii (strain RML369-C)
O34862 1.49e-100 310 39 7 443 3 ytcA Putative UDP-glucose 6-dehydrogenase YtcA Bacillus subtilis (strain 168)
Q4UK39 4.16e-100 309 36 3 445 3 udg UDP-glucose 6-dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q68VX0 2.05e-99 307 36 3 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O05973 2.57e-99 306 36 3 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia prowazekii (strain Madrid E)
Q92GB1 4.97e-98 303 36 4 438 3 udg UDP-glucose 6-dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
D4GYH5 2e-78 253 37 9 429 1 aglM UDP-glucose 6-dehydrogenase AglM Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
O02373 4.7e-77 251 35 13 470 1 sgl UDP-glucose 6-dehydrogenase Drosophila melanogaster
Q19905 7.45e-77 250 35 16 464 1 sqv-4 UDP-glucose 6-dehydrogenase Caenorhabditis elegans
B7F958 1.58e-76 249 35 14 474 2 UGD2 UDP-glucose 6-dehydrogenase 2 Oryza sativa subsp. japonica
Q2QS13 1.48e-74 244 34 14 474 2 UGD5 UDP-glucose 6-dehydrogenase 5 Oryza sativa subsp. japonica
Q5F3T9 2.27e-74 244 35 13 469 2 UGDH UDP-glucose 6-dehydrogenase Gallus gallus
Q2QS14 2.71e-74 243 33 13 474 2 UGD4 UDP-glucose 6-dehydrogenase 4 Oryza sativa subsp. japonica
Q9AUV6 3.53e-74 243 33 13 474 2 UGD3 UDP-glucose 6-dehydrogenase 3 Oryza sativa subsp. japonica
O60701 3.76e-73 241 34 11 472 1 UGDH UDP-glucose 6-dehydrogenase Homo sapiens
Q5R7B3 4e-73 241 34 11 472 2 UGDH UDP-glucose 6-dehydrogenase Pongo abelii
O70475 5.91e-73 240 35 11 467 1 Ugdh UDP-glucose 6-dehydrogenase Mus musculus
P12378 3.84e-72 238 34 11 467 1 UGDH UDP-glucose 6-dehydrogenase Bos taurus
O70199 4.94e-72 238 35 11 467 1 Ugdh UDP-glucose 6-dehydrogenase Rattus norvegicus
Q75GS4 6.49e-72 237 33 14 476 3 UGD1 UDP-glucose 6-dehydrogenase 1 Oryza sativa subsp. japonica
Q9FZE1 1.06e-71 237 32 11 475 1 UGD1 UDP-glucose 6-dehydrogenase 1 Arabidopsis thaliana
Q96558 1.49e-68 228 31 12 473 2 UGD1 UDP-glucose 6-dehydrogenase 1 Glycine max
Q9FM01 3.87e-68 228 32 13 473 1 UGD4 UDP-glucose 6-dehydrogenase 4 Arabidopsis thaliana
Q9LF33 2.39e-67 225 31 12 477 1 UGD3 UDP-glucose 6-dehydrogenase 3 Arabidopsis thaliana
Q9LIA8 2.13e-66 223 32 13 473 1 UGD2 UDP-glucose 6-dehydrogenase 2 Arabidopsis thaliana
Q58454 7.17e-63 221 43 5 275 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q58454 4.98e-27 117 36 4 184 3 MJ1054 Uncharacterized protein MJ1054 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q88NC4 5.69e-59 202 33 9 417 3 algD GDP-mannose 6-dehydrogenase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
O07299 1.31e-57 199 32 9 417 3 algD GDP-mannose 6-dehydrogenase Pseudomonas savastanoi pv. phaseolicola
Q887P8 2.31e-57 198 34 8 381 2 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
P59793 9.96e-57 196 32 8 417 3 algD GDP-mannose 6-dehydrogenase Pseudomonas syringae pv. syringae
P11759 1.48e-56 196 34 9 382 1 algD GDP-mannose 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P51585 3.27e-51 182 32 6 366 3 algD GDP-mannose 6-dehydrogenase Azotobacter vinelandii
O59284 8.28e-46 167 28 12 448 1 PH1618 UDP-N-acetyl-D-mannosamine dehydrogenase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
A4FY94 1.57e-41 155 26 12 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
A6VK13 1.98e-41 155 26 13 452 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
Q6LZC3 3.9e-41 154 26 12 452 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
P58591 1e-40 153 28 9 431 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q04873 3.12e-40 151 29 11 387 3 udg UDP-glucose 6-dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A6USK4 4.21e-40 152 26 11 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
Q57871 1.05e-39 150 26 11 449 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q45410 1.72e-39 150 27 10 435 3 epsD NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase Ralstonia solanacearum
P76373 5.02e-39 148 27 8 365 1 ugd UDP-glucose 6-dehydrogenase Escherichia coli (strain K12)
Q7DBF9 1.26e-38 147 26 8 365 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O157:H7
Q8FG45 2.35e-38 146 26 8 365 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q47329 3.22e-38 145 28 9 361 3 kfiD UDP-glucose 6-dehydrogenase Escherichia coli
O33952 2.95e-37 143 28 11 370 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli
Q04872 5.12e-37 142 29 11 371 3 ugd UDP-glucose 6-dehydrogenase Escherichia coli O111:H-
P37791 6.16e-36 139 26 6 359 5 udg Putative UDP-glucose 6-dehydrogenase Shigella flexneri
Q0P8H3 1.36e-35 139 26 11 391 1 kfiD UDP-glucose 6-dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P0C0F4 6.93e-33 131 27 11 373 1 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes
Q8NKX0 6.93e-33 131 27 11 373 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M18 (strain MGAS8232)
Q5X9A8 6.93e-33 131 27 11 373 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
P0DG69 7.43e-33 131 27 11 373 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DG68 1.03e-32 131 27 11 373 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
P0C0F5 1.34e-32 130 27 11 373 3 hasB UDP-glucose 6-dehydrogenase Streptococcus pyogenes serotype M1
A6UU98 2.83e-31 127 24 11 448 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3)
P67067 2.89e-31 127 26 12 430 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Shigella flexneri
P27829 2.89e-31 127 26 12 430 1 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli (strain K12)
P67066 2.89e-31 127 26 12 430 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Escherichia coli O157:H7
Q57346 4.81e-30 123 25 9 367 3 cap3A UDP-glucose 6-dehydrogenase Streptococcus pneumoniae
Q8ZAE4 1.38e-28 120 26 11 422 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Yersinia pestis
Q8Z389 7.55e-28 117 25 10 385 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhi
Q9L6R4 3.39e-27 115 25 10 385 3 wecC UDP-N-acetyl-D-mannosamine dehydrogenase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
G3XD94 1.63e-23 105 26 13 425 1 wbpA UDP-N-acetyl-D-glucosamine 6-dehydrogenase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P39861 1.14e-20 97 25 13 431 3 capL Protein CapL Staphylococcus aureus
Q04972 2.32e-17 87 23 13 437 3 vipA Vi polysaccharide biosynthesis protein VipA/TviB Salmonella typhi

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05810
Feature type CDS
Gene -
Product UDP-glucose/GDP-mannose dehydrogenase family protein
Location 1236699 - 1238042 (strand: -1)
Length 1344 (nucleotides) / 447 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_970
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain
PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1004 Cell wall/membrane/envelope biogenesis (M) M UDP-glucose 6-dehydrogenase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG037990 UDP-glucose/GDP-mannose dehydrogenase family protein VF0465 Immune modulation

Protein Sequence

MKVTVFGIGYVGLVQATVLAEVGHDVMCVDVDAQKVENLKNGLIPIFEPGLTPLVKKNYEEGRLSFTTDAAKGVAHGTLQFIAVGTPPDEDGSADLQYVTAVARTIAQYMDGYKVIIDKSTVPVGTADKVNATIKAAQAERGTDFAYDVVSNPEFLKEGAAVADCMRPERIVIGCDNEGVVDIIRELYEPFNRNHDRMIVMDIRSAELTKYAANCMLATKISFMNEISNLAELLGADIENVRQGIGSDSRIGYHFIYPGCGYGGSCFPKDVQALIRTAEHIGFTPRILQAVEEVNELQKYKLPSFIKRHFGDDLRGKTFAVWGLSFKPNTDDMREASSRVLLQELWAAGAKIQAYDPEAMQEAQRVFGQRDDLVLMGTKEAALHGADALVICTEWQSFRAPDFDTIKSGLKTPVIFDGRNLYDPERLENRGFIYYGIGRGASINPVI

Flanking regions ( +/- flanking 50bp)

AGATTGGCTGAAAACATTACAGAATTAATTATTGTCGCTATAGGTGAACTATGAAAGTAACTGTATTTGGAATCGGATATGTAGGGCTGGTACAGGCAACCGTTCTGGCTGAAGTCGGTCATGATGTTATGTGTGTCGATGTCGATGCACAGAAAGTTGAAAACCTGAAAAACGGTCTTATTCCGATTTTTGAACCGGGTTTAACGCCGCTGGTAAAGAAAAATTATGAAGAAGGGCGTTTAAGCTTTACCACAGATGCCGCAAAAGGTGTGGCACACGGCACATTGCAGTTTATTGCGGTCGGTACGCCACCGGATGAAGATGGCTCCGCTGATTTACAATATGTGACGGCGGTTGCCCGCACTATTGCGCAGTATATGGACGGTTATAAAGTCATTATTGATAAATCAACTGTTCCTGTCGGTACGGCAGACAAAGTCAATGCAACGATCAAAGCCGCTCAGGCCGAACGCGGTACTGATTTTGCGTACGATGTGGTTTCCAACCCGGAATTCCTGAAAGAAGGGGCGGCGGTTGCAGACTGTATGCGTCCTGAACGTATTGTTATCGGCTGTGATAACGAAGGCGTTGTGGATATCATCCGTGAACTGTATGAGCCGTTTAACCGTAATCATGATCGCATGATTGTGATGGATATCCGCAGTGCAGAGCTGACAAAATACGCAGCAAACTGCATGCTGGCGACAAAAATCAGCTTTATGAATGAGATTTCAAACCTCGCGGAACTGCTGGGTGCGGATATCGAAAATGTCCGTCAGGGGATTGGTTCTGACTCCCGTATCGGCTATCACTTTATTTATCCGGGTTGTGGTTATGGCGGCTCCTGCTTCCCTAAAGATGTGCAGGCGCTTATCCGTACCGCAGAGCACATTGGTTTCACGCCGAGAATTTTGCAGGCTGTGGAAGAAGTGAATGAGTTGCAGAAATACAAACTGCCTTCTTTTATTAAGCGCCACTTCGGTGATGACCTGCGCGGCAAAACGTTTGCAGTGTGGGGGCTCTCTTTCAAACCGAATACGGATGATATGCGTGAAGCCTCCAGCCGTGTTCTGTTACAGGAGTTGTGGGCAGCCGGTGCGAAAATTCAGGCTTATGACCCGGAAGCCATGCAGGAAGCGCAGCGTGTTTTCGGACAGCGTGATGACCTTGTACTGATGGGCACCAAAGAAGCGGCACTGCACGGCGCAGATGCACTGGTTATCTGTACCGAATGGCAGAGTTTCCGTGCACCGGATTTTGATACCATTAAATCAGGTCTGAAAACACCGGTTATTTTTGACGGGCGTAACCTTTATGACCCGGAACGTTTAGAAAACCGTGGCTTTATCTATTATGGTATAGGCCGTGGTGCTTCCATTAATCCGGTAATTTGAGTCTGAATATGAAAATACTTGTAACCGGCGCGGCTGGTTTTATTGGTTAT