PF18269


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF18269, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF18269
Description T3SS EscN ATPase C-terminal domain

Occurence in the database

PF18269 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_225 FBDBKF_00605 100567 101931 1 fliI flagellar protein export ATPase FliI Morganella morganii S1
1 group_1459 FBDBKF_09330 96475 97767 -1 sctN type III secretion system ATPase SctN Morganella morganii S1
2 group_225 EHELCC_00940 206937 208301 -1 fliI flagellar protein export ATPase FliI Morganella morganii S2
3 group_1459 EHELCC_10080 48337 49629 1 sctN type III secretion system ATPase SctN Morganella morganii S2
4 group_225 NLDBIP_02520 471835 473199 1 fliI flagellar protein export ATPase FliI Morganella morganii S4
5 group_1459 NLDBIP_10425 26608 27900 1 sctN type III secretion system ATPase SctN Morganella morganii S4
6 group_225 LHKJJB_04035 79076 80440 1 fliI flagellar protein export ATPase FliI Morganella morganii S3
7 group_1459 LHKJJB_10930 163628 164920 -1 sctN type III secretion system ATPase SctN Morganella morganii S3
8 group_225 HKOGLL_03010 207142 208506 -1 fliI flagellar protein export ATPase FliI Morganella morganii S5
9 group_1459 HKOGLL_13990 96929 98221 -1 sctN type III secretion system ATPase SctN Morganella morganii S5
10 group_225 F4V73_RS06615 1377484 1378848 1 fliI flagellar protein export ATPase FliI Morganella psychrotolerans
11 group_225 F4V73_RS08315 1723851 1725170 1 FliI/YscN family ATPase Morganella psychrotolerans
12 group_1459 F4V73_RS10635 257461 258753 1 sctN type III secretion system ATPase SctN Morganella psychrotolerans
13 group_225 PMI_RS07975 1746683 1748056 1 fliI flagellar protein export ATPase FliI Proteus mirabilis HI4320
14 group_1459 PMI_RS13265 2943068 2944366 -1 sctN type III secretion system ATPase SctN Proteus mirabilis HI4320