PF07883


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07883, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07883
Description Cupin domain

Occurence in the database

PF07883 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 9 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2525 FBDBKF_02285 144727 145074 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S1
1 group_2882 FBDBKF_11560 108761 109333 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S1
2 group_2525 EHELCC_02755 532547 532894 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S2
3 group_2882 EHELCC_17480 7104 7676 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S2
4 group_2525 NLDBIP_00705 147242 147589 1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S4
5 group_2882 NLDBIP_18690 7851 8423 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S4
6 group_2525 LHKJJB_01330 245096 245443 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S3
7 group_2882 LHKJJB_17920 7104 7676 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S3
8 group_2525 HKOGLL_01370 250607 250954 -1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S5
9 group_2882 HKOGLL_18730 16555 17127 1 qdoI Cupin domain protein related to quercetin dioxygenase Morganella morganii S5
10 group_3824 F4V73_RS02710 570627 571025 1 cupin domain-containing protein Morganella psychrotolerans
11 group_2525 F4V73_RS04660 982727 983068 -1 cupin domain-containing protein Morganella psychrotolerans
12 group_4020 F4V73_RS04875 1036471 1036833 1 cupin domain-containing protein Morganella psychrotolerans
13 group_4068 F4V73_RS07330 1530387 1530833 1 cupin domain-containing protein Morganella psychrotolerans
14 group_2882 F4V73_RS08115 1684368 1684931 1 XRE family transcriptional regulator Morganella psychrotolerans
15 group_1919 PMI_RS08790 1922171 1922956 -1 helix-turn-helix transcriptional regulator Proteus mirabilis HI4320
16 group_4491 PMI_RS09510 2074733 2075128 1 cupin domain-containing protein Proteus mirabilis HI4320
17 group_3824 PMI_RS11705 2586296 2586694 1 cupin domain-containing protein Proteus mirabilis HI4320
18 group_34 PMI_RS14600 3236648 3237496 -1 chbR transcriptional regulator ChbR Proteus mirabilis HI4320
19 group_2224 PMI_RS17505 3841740 3842318 -1 XRE family transcriptional regulator Proteus mirabilis HI4320