Homologs in group_3824

Help

1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS02710 F4V73_RS02710 66.7 Morganella psychrotolerans - cupin domain-containing protein

Distribution of the homologs in the orthogroup group_3824

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3824

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11705
Feature type CDS
Gene -
Product cupin domain-containing protein
Location 2586296 - 2586694 (strand: 1)
Length 399 (nucleotides) / 132 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3824
Orthogroup size 2
N. genomes 2

Actions

Genomic region

Domains

PF07883 Cupin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1917 General function prediction only (R) R Cupin domain protein related to quercetin dioxygenase

Protein Sequence

MSLYLSSEMISYDMDLNRNEGEESKIQAKFIHGSNFTMAFWTFKTNAIIPEHKHEHETATSILKGSLKLTVNNRIVYLHAGDSFIIPSWAVHHAIALEPSEVIDVYTPVREDYVARQNGVIKTYLETSQPQG

Flanking regions ( +/- flanking 50bp)

AGTCAAAACGTTAATTATCTAGTCACTTGGTTAATAAAAAGGAAAAAACTATGAGCTTATATTTATCTAGTGAAATGATCTCTTATGATATGGATCTAAATAGAAACGAAGGTGAAGAAAGTAAAATTCAAGCTAAATTTATTCATGGCTCTAATTTTACAATGGCATTTTGGACATTTAAAACTAATGCCATTATTCCTGAACATAAACATGAACATGAAACTGCCACATCCATACTAAAAGGCTCTTTGAAACTGACGGTAAATAACCGCATTGTTTATTTACATGCTGGCGACTCTTTTATTATTCCCTCATGGGCCGTTCATCACGCAATTGCTTTAGAGCCTTCTGAGGTTATTGATGTCTATACCCCCGTTAGAGAAGACTATGTTGCAAGGCAAAATGGCGTTATTAAAACCTATTTAGAAACATCTCAACCCCAAGGATAACAAAAAGCGAGGATCACCTCGCTTTTTCTATTCTTACTATAATCGCAGGA